RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
CHCHD3-204ENST00000457942 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 ADARB2-AS1A8MUL3 147 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 H0YHG0 523 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 WBP4O75554 376 aaKnown RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 CDRT1O95170 752 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 IL1AP01583 271 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 PF4P02776 101 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 CSTBP04080 98 aaKnown RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 MYL12AP19105 171 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 GNG10P50151 68 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 ADARB1P78563 741 aaKnown RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 HES1Q14469 280 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 NEK7Q8TDX7 302 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 WIPF2Q8TF74 440 aaPredicted RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 NRG4Q8WWG1 115 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 FGF20Q9NP95 211 aaPredicted RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 PCDHB16Q9NRJ7 776 aa12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 MRPS18AQ9NVS2 196 aaKnown RBP12.57□□□□□ -0.4
CHCHD3-204ENST00000457942 A0A087X0M5 115 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 A0A1B0GX30 115 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 IRGMA1A4Y4 181 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 K7EIL1 84 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 M0QZK8 103 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 OR7C1O76099 320 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 GNAO1P09471 354 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 FAM106CPP0CH98 169 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 DCKP27707 260 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 ZNF93P35789 620 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 CAPGP40121 348 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 KCNJ3P48549 501 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 ETV1P50549 477 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 MED21Q13503 144 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 CCDC58Q4VC31 144 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 UTF1Q5T230 341 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 OR2G6Q5TZ20 316 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 XAF1Q6GPH4 301 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 OR10X1Q8NGY0 326 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 OR56B4Q8NH76 319 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 PLPPR1Q8TBJ4 325 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 DPCDQ9BVM2 203 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 METTL9Q9H1A3 318 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 C8orf4Q9NR00 106 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 CHCHD3Q9NX63 227 aaKnown RBP12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 ST3GAL6Q9Y274 331 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
CHCHD3-204ENST00000457942 J3QR06 171 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 SNRNP70P08621 437 aaKnown RBP12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 IGLL1P15814 213 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 SERPINA2P20848 420 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 BDKRB2P30411 391 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 SSTR5P35346 364 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 AQP4P55087 323 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 CD83Q01151 205 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 MADCAM1Q13477 382 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 RSBN1Q5VWQ0 802 aaPredicted RBP12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 TTC23Q5W5X9 447 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 ZNF529Q6P280 563 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 OSR2Q8N2R0 312 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 SUMF2Q8NBJ7 301 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 PAK1IP1Q9NWT1 392 aaPredicted RBP12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 CKLFQ9UBR5 152 aa12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 EXOSC1Q9Y3B2 195 aaKnown RBP12.55□□□□□ -0.4
CHCHD3-204ENST00000457942 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 TMEM11P17152 192 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 RBM11P57052 281 aaKnown RBP12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 RIPK1Q13546 671 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 ATAD3CQ5T2N8 411 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 DRAM1Q8N682 238 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 SETD9Q8NE22 299 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 MYDGFQ969H8 173 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 ORAI1Q96D31 301 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 SMIM19Q96E16 107 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 VCXQ9H320 206 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 PSG11Q9UQ72 335 aa12.54□□□□□ -0.4
CHCHD3-204ENST00000457942 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 TMEM30CPA0ZSE6 113 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 GEMIN2O14893 280 aaKnown RBP12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 RAB7AP51149 207 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 HNF4GQ14541 408 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 C8orf59Q8N0T1 100 aaPredicted RBP12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 OR52N1Q8NH53 320 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 BABAM2Q9NXR7 383 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms