RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ACP1P24666 158 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 MSX1P28360 303 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 SNU13P55769 128 aaKnown RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 BTNL3Q6UXE8 466 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 TMEM123Q8N131 208 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 PRR18Q8N4B5 295 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 NKAIN3Q8N8D7 197 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ZNF701Q9NV72 531 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 SLC33A1O00400 549 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-213ENST00000457179 TRAF3IP2O43734 574 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-213ENST00000457179 LIFP15018 202 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 PAX5Q02548 391 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-213ENST00000457179 TEX38Q6PEX7 206 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 OR8B12Q8NGG6 310 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 GINS3Q9BRX5 216 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 PROK2Q9HC23 129 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 A0A087WWC5 75 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 XKRY2A2RUG3 117 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 PINLYPA6NC86 204 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 TNFSF12O43508 249 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 VAX1Q5SQQ9 334 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 ABHD17BQ5VST6 288 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 BATF2Q8N1L9 274 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 SLC22A24Q8N4F4 322 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 PTX4Q96A99 478 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 CABLES2Q9BTV7 478 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 RELNP78509 3460 aa11.76□□□□□ -0.53
TOP3B-213ENST00000457179 E5RGE8 158 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 CSNK1A1P48729 337 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 MLF1P58340 268 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 RAB11AP62491 216 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 PHYHD1Q5SRE7 291 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 FAM185AQ8N0U4 392 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 OR5D14Q8NGL3 314 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 ABHD3Q8WU67 409 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 R3HDM4Q96D70 268 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 SIGLEC12Q96PQ1 595 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 TMEM9BQ9NQ34 198 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 NSG2Q9Y328 171 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 DHRS7CA6NNS2 312 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 E9PLN8 166 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 K7N7A8 449 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 CRTAPO75718 401 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-213ENST00000457179 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
TOP3B-213ENST00000457179 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
TOP3B-213ENST00000457179 MMP16P51512 607 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 SUMO3P55854 103 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-213ENST00000457179 GABREP78334 506 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 P2RY6Q15077 328 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 TSPO2Q5TGU0 170 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 SULF2Q8IWU5 870 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 NOXO1Q8NFA2 376 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 OR4X1Q8NH49 305 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 TOMM40LQ969M1 308 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 SRXN1Q9BYN0 137 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 LPAR5Q9H1C0 372 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 PLEK2Q9NYT0 353 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 LOC102723996A0A087X1L8 192 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 FIGNL2A6NMB9 653 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 BPNT1O95861 308 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 CARD18P57730 90 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 RPL23AP62750 156 aaKnown RBP11.75□□□□□ -0.53
TOP3B-213ENST00000457179 COL10A1Q03692 680 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 FAM180AQ6UWF9 173 aa11.75□□□□□ -0.53
TOP3B-213ENST00000457179 MRPS28Q9Y2Q9 187 aaKnown RBP11.75□□□□□ -0.53
TOP3B-213ENST00000457179 CADP27708 2225 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 TLN1Q9Y490 2541 aaKnown RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 TGOLN2O43493 480 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 B4GALT1P15291 398 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 HLA-DRB3P79483 266 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ZP4Q12836 540 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 HERPUD1Q15011 391 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 PEAR1Q5VY43 1037 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ULBP2Q9BZM5 246 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ACTR3CQ9C0K3 210 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 RHBDD3Q9Y3P4 386 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ATRXP46100 2492 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 TLX3O43711 291 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 CBR3O75828 277 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 SUCLG1P53597 346 aaKnown RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 DSCR4P56555 118 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 QRFPP83859 136 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 PLGLB1Q02325 96 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ICAM4Q14773 271 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 TRIP6Q15654 476 aaKnown RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ARSJQ5FYB0 599 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-213ENST00000457179 ADGRG7Q96K78 797 aa11.74□□□□□ -0.53
TOP3B-213ENST00000457179 OXGR1Q96P68 337 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms