RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 BRICD5Q6PL45 260 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 SHISA2Q6UWI4 295 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 PLPPR1Q8TBJ4 325 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 AJUBAQ96IF1 538 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 CST11Q9H112 138 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 NCOR1P1Q9H4R4 102 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 IFT22Q9H7X7 185 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 RAB18Q9NP72 206 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 MINOS1-NBL1R4GNA1 71 aa14.66□□□□□ -0.06
PDLIM2-215ENST00000456545 TMEM30CPA0ZSE6 113 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 CLPSL1A2RUU4 121 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 FAM90A8PA6NJQ4 464 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 UCHL1P09936 223 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 UBBP0CG47 229 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 RPS25P62851 125 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 LTC4SQ16873 150 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 RSBN1Q5VWQ0 802 aaPredicted RBP14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 OLFML2AQ68BL7 652 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 SLC35E4Q6ICL7 350 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 ZNF367Q7RTV3 350 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 SVOPQ8N4V2 548 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 OR13A1Q8NGR1 328 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 MRGPRDQ8TDS7 321 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 CALYQ9NYX4 217 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 MMP24Q9Y5R2 645 aa14.65□□□□□ -0.06
PDLIM2-215ENST00000456545 DENRO43583 198 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 GZMHP20718 246 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 ARHGDIBP52566 201 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 GABARAPL2P60520 117 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 RELBQ01201 579 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 TBCEQ15813 527 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 C17orf58Q2M2W7 97 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 LRRTM1Q86UE6 522 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 RFESDQ8TAC1 157 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 CCDC107Q8WV48 283 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM46BQ96A09 425 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 CREB3L1Q96BA8 519 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 PLGRKTQ9HBL7 147 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 ACOT13Q9NPJ3 140 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 IDI2-AS1Q9NZ38 188 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 ZNF581Q9P0T4 197 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 DPM3Q9P2X0 92 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 RNF114Q9Y508 228 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 PEX16Q9Y5Y5 336 aa14.64□□□□□ -0.07
PDLIM2-215ENST00000456545 TRAV39A0A0B4J263 110 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 LEUTXA8MZ59 168 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 MRPS14O60783 128 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 MPIG6BO95866 241 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 HTR2CP28335 458 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 GDNFP39905 211 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 CEACAM3P40198 252 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 RAB13P51153 203 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 GP2P55259 537 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 RAB12Q6IQ22 244 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 BAIAP2L2Q6UXY1 529 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 DYNAPQ8N1N2 210 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 TMEM104Q8NE00 496 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 YTHDF1Q9BYJ9 559 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 ETAA1Q9NY74 926 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 PITPNC1Q9UKF7 332 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 TRAPPC2LQ9UL33 140 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 STAB1Q9NY15 2570 aa14.63□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A10PA6NDY2 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A18PA6NE21 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A16PA6NEW6 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A20PA6NIJ5 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A7PA6NKC0 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A22PA8MWA6 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A12PA8MX19 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A5PA8MXJ8 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A23PA8MXZ1 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 AIPO00170 330 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 F2RL2O00254 374 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 SC5DO75845 299 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 IL1AP01583 271 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A15PP0C7V4 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A13PP0C7W8 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A14PP0C7W9 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FAM90A24PP0C7X0 464 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 FUT3P21217 361 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 GABRA5P31644 462 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 RANBP1P43487 201 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 PAX5Q02548 391 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 EMX1Q04741 257 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 C1orf100Q5SVJ3 147 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 TMEM91Q6ZNR0 172 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 LIAT1Q6ZQX7 453 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 Q6ZSV7 163 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 LYPD6Q86Y78 171 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 DTX3Q8N9I9 347 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 OR9G1Q8NH87 305 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 SGMS2Q8NHU3 365 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 ZNF286AQ9HBT8 521 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 AK6Q9Y3D8 172 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 LRRC42Q9Y546 428 aa14.62□□□□□ -0.07
PDLIM2-215ENST00000456545 VGLL3A8MV65 326 aa14.61□□□□□ -0.07
PDLIM2-215ENST00000456545 CGB3P0DN86 165 aa14.61□□□□□ -0.07
PDLIM2-215ENST00000456545 CGB7P0DN87 165 aa14.61□□□□□ -0.07
PDLIM2-215ENST00000456545 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-215ENST00000456545 BRS3P32247 399 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms