RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 WIPF1O43516 503 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 XPNPEP2O43895 674 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 PEX14O75381 377 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 TSPAN15O95858 294 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 CGB3P0DN86 165 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 CGB7P0DN87 165 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 VSIG10L2P0DP72 767 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 GTF2F2P13984 249 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 NFYBP25208 207 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 MAPK3P27361 379 aaPredicted RBP14.35□□□□□ -0.11
MSH6-207ENST00000456246 GDNFP39905 211 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 BAIAP2L2Q6UXY1 529 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 SUMF2Q8NBJ7 301 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 OR13A1Q8NGR1 328 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 MRPS24Q96EL2 167 aaKnown RBP14.35□□□□□ -0.11
MSH6-207ENST00000456246 MMP28Q9H239 520 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 SPACA1Q9HBV2 294 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 TMEM30CPA0ZSE6 113 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 NPIPB11E5RHQ5 1161 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 FBXO24O75426 580 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 GZMHP20718 246 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 SERPINA2P20848 420 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 ARSJQ5FYB0 599 aaPredicted RBP14.34□□□□□ -0.11
MSH6-207ENST00000456246 TPTE2P1Q5T6R2 138 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 NKAIN3Q8N8D7 197 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 ZFP41Q8N8Y5 198 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 BPIFB6Q8NFQ5 453 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 TFAP2CQ92754 450 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 OR14A2Q96R54 314 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 IDI2-AS1Q9NZ38 188 aa14.34□□□□□ -0.11
MSH6-207ENST00000456246 FAM172BPA6NC97 362 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 GEMIN2O14893 280 aaKnown RBP14.33□□□□□ -0.12
MSH6-207ENST00000456246 CELP19835 753 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 DEFA6Q01524 100 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 DOC2BQ14184 412 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 SLC22A6Q4U2R8 563 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 RNLSQ5VYX0 342 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 LAIR2Q6ISS4 152 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 JAGN1Q8N5M9 183 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 NANOGP1Q8N7R0 232 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 PLPPR1Q8TBJ4 325 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 MRGPRDQ8TDS7 321 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 RPEQ96AT9 228 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 DERL3Q96Q80 235 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 FKBP14Q9NWM8 211 aa14.33□□□□□ -0.12
MSH6-207ENST00000456246 TRAV8-7A0A075B6U6 113 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 LY6LH3BQJ8 138 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 J3QR06 171 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 M0QZK8 103 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 OR2F2O95006 317 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 JUNBP17275 347 aaPredicted RBP14.32□□□□□ -0.12
MSH6-207ENST00000456246 VDAC2P45880 294 aaPredicted RBP14.32□□□□□ -0.12
MSH6-207ENST00000456246 RBM39Q14498 530 aaKnown RBP14.32□□□□□ -0.12
MSH6-207ENST00000456246 TOMM40LQ969M1 308 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 ORAI1Q96D31 301 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 MND1Q9BWT6 205 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 WNT10AQ9GZT5 417 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 RAB9BQ9NP90 201 aa14.32□□□□□ -0.12
MSH6-207ENST00000456246 MRPS28Q9Y2Q9 187 aaKnown RBP14.32□□□□□ -0.12
MSH6-207ENST00000456246 PNMA8CA0A1B0GUJ8 204 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 MAGEA13PA6NCF6 341 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A10PA6NDY2 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A18PA6NE21 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A16PA6NEW6 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A20PA6NIJ5 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A7PA6NKC0 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A12PA8MX19 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A5PA8MXJ8 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A23PA8MXZ1 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A15PP0C7V4 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A13PP0C7W8 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A14PP0C7W9 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A24PP0C7X0 464 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM106CPP0CH98 169 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 EMX1Q04741 257 aaPredicted RBP14.31□□□□□ -0.12
MSH6-207ENST00000456246 MADCAM1Q13477 382 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 HABP2Q14520 560 aaPredicted RBP14.31□□□□□ -0.12
MSH6-207ENST00000456246 ATAD3CQ5T2N8 411 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 AWAT2Q6E213 333 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 MS4A15Q8N5U1 240 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 OR52M1Q8NGK5 317 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 FAM110DQ8TAY7 271 aaPredicted RBP14.31□□□□□ -0.12
MSH6-207ENST00000456246 NEK7Q8TDX7 302 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 WIPF2Q8TF74 440 aaPredicted RBP14.31□□□□□ -0.12
MSH6-207ENST00000456246 MYDGFQ969H8 173 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 MUL1Q969V5 352 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 RBM14Q96PK6 669 aaKnown RBP14.31□□□□□ -0.12
MSH6-207ENST00000456246 UQCC2Q9BRT2 126 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 SLC25A33Q9BSK2 321 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 SCN3BQ9NY72 215 aa14.31□□□□□ -0.12
MSH6-207ENST00000456246 RCC2Q9P258 522 aaKnown RBP14.31□□□□□ -0.12
MSH6-207ENST00000456246 KCNAB3O43448 404 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 OPN1MWP04001 364 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 CDK1P06493 297 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 OPN1MW2P0DN77 364 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 OPN1MW3P0DN78 364 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 SSTR5P35346 364 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 RAB7AP51149 207 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 BLCAPP62952 87 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms