RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF468Q5VIY5 522 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LINC01545Q5VT33 79 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TEPPQ6URK8 271 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 Q6ZSR6 202 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OSTM1Q86WC4 334 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR10Q1Q8NGQ4 319 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LSM10Q969L4 123 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 GNRHR2Q96P88 292 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 HINT3Q9NQE9 182 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 IL36GQ9NZH8 169 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 FAM157CP0CG43 387 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 HOXD9P28356 352 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ID1P41134 155 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LIM2P55344 173 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 AQP3Q92482 292 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SIGLEC7Q9Y286 467 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 CARHSP1Q9Y2V2 147 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 RAI1Q7Z5J4 1906 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 PLPP1O14494 284 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 RELQ04864 619 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 WDFY1Q8IWB7 410 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 UBALD2Q8IYN6 164 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 C5orf17Q8NAS9 161 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 PTPMT1Q8WUK0 201 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 FGF13Q92913 245 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 NAGKQ9UJ70 344 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LEUTXA8MZ59 168 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SOCS6O14544 535 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LAMTOR5O43504 91 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TRGC1P0CF51 173 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 UCP2P55851 309 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LSM11P83369 360 aaKnown RBP eCLIP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SRSF5Q13243 272 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR5AR1Q8NGP9 310 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 MBD3L1Q8WWY6 194 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SNX22Q96L94 193 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 CISD1Q9NZ45 108 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 FLRT3Q9NZU0 649 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 A0A1W2PQM1 296 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CD5P06127 495 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TSPOP30536 169 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 NOXO1Q8NFA2 376 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 NUDT10Q8NFP7 164 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TRBV11-1A0A0K0K1C0 115 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 POU2AF1Q16633 256 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM88Q6PEY1 159 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ZADH2Q8N4Q0 377 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SLC25A2Q9BXI2 301 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 GLIS2Q9BZE0 524 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ZFHX2Q9C0A1 2572 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 HPXP02790 462 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CD3DP04234 171 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CXCL12P48061 93 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SH2D5Q6ZV89 423 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 MAVSQ7Z434 540 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 OR4X2Q8NGF9 303 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 IGFLR1Q9H665 355 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 MASP2O00187 686 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SCRG1O75711 98 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 NKX2-2O95096 273 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ZFPL1O95159 310 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 PVRP15151 417 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 RGRP47804 291 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 DGCR2P98153 550 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 PHLDA2Q53GA4 152 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 OR4D9Q8NGE8 314 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 GUCD1Q96NT3 240 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 KIR2DL4Q99706 377 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CNTD2Q9H8S5 307 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 MTCH1Q9NZJ7 389 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 JKAMPQ9P055 326 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 DIRC3C9JPN6 131 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SIGLEC5O15389 551 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SYNGR2O43760 224 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ELLP55199 621 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 HES1Q14469 280 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 OR2B11Q5JQS5 317 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM215Q68D42 235 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SLC25A40Q8TBP6 338 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 A0A0B4J293 547 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 NPIPB9F8W1W9 429 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 RHBDL1O75783 438 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 GOSR1O95249 250 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CEBPDP49716 269 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 PSMB2P49721 201 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 C10orf128Q5T292 105 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 HIST1H2BAQ96A08 127 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 RBPJLQ9UBG7 517 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 AJAP1Q9UKB5 411 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 EPG5Q9HCE0 2579 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 PNLIPP16233 465 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CD27P26842 260 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 RHOGP84095 191 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 RPL18Q07020 188 aaKnown RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 SMN1Q16637 294 aaKnown RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 LINC00303Q3SY05 128 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM136Q6ZRR5 245 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 OR9G4Q8NGQ1 327 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TNFRSF13CQ96RJ3 184 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms