RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GDPGP1Q6ZNW5 385 aa14.06□□□□□ -0.16
USP39-208ENST00000455732 CLEC7AQ9BXN2 247 aa14.06□□□□□ -0.16
USP39-208ENST00000455732 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
USP39-208ENST00000455732 LINC00574Q9H8X3 128 aa14.06□□□□□ -0.16
USP39-208ENST00000455732 KIF25Q9UIL4 384 aa14.06□□□□□ -0.16
USP39-208ENST00000455732 A0A087X0M5 115 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 KBTBD11-OT1A0A1B0GTJ5 212 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 A0A1B0GX30 115 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 VGLL3A8MV65 326 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 ARL6IP5O75915 188 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 CRYBA1P05813 215 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 CGB3P0DN86 165 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 CGB7P0DN87 165 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 CDK2P24941 298 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 CD34P28906 385 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 EMX1Q04741 257 aaPredicted RBP14.05□□□□□ -0.16
USP39-208ENST00000455732 C17orf58Q2M2W7 97 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 LRRC75BQ2VPJ9 315 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 MINOS1Q5TGZ0 78 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 PRAMEF5Q5TYX0 476 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 SLC35E4Q6ICL7 350 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 LHFPL4Q7Z7J7 247 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 RTN4RL2Q86UN3 420 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 SVOPQ8N4V2 548 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 TMEM104Q8NE00 496 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 SGMS2Q8NHU3 365 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 PLPPR1Q8TBJ4 325 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 MALSU1Q96EH3 234 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 Q96M66 194 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 MINOS1-NBL1R4GNA1 71 aa14.05□□□□□ -0.16
USP39-208ENST00000455732 MEIKINA0A087WXM9 373 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 A0A1B0GUS0 222 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 MGMTP16455 207 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 GLP1RP43220 463 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 RAG2P55895 527 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 SSX1Q16384 188 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 LDLRAD2Q5SZI1 272 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 ZNF565Q8N9K5 539 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 OR13A1Q8NGR1 328 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 OR4F5Q8NH21 305 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 SSX3Q99909 188 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 CST11Q9H112 138 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 NDUFB11Q9NX14 153 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 ING3Q9NXR8 418 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 CALYQ9NYX4 217 aa14.04□□□□□ -0.16
USP39-208ENST00000455732 TMEM30CPA0ZSE6 113 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 H3BUX3 64 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 SLC22A1O15245 554 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 CRTAPO75718 401 aaPredicted RBP14.03□□□□□ -0.16
USP39-208ENST00000455732 IL1AP01583 271 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 GDNFP39905 211 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 FABP5Q01469 135 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 DYNC1I2Q13409 638 aaKnown RBP14.03□□□□□ -0.16
USP39-208ENST00000455732 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 CD200R1LQ6Q8B3 271 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 SPARTQ8N0X7 666 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 ABHD12Q8N2K0 398 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 OR4P4Q8NGL7 312 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 SELENOIQ9C0D9 397 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 BANF2Q9H503 90 aa14.03□□□□□ -0.16
USP39-208ENST00000455732 NPIPB11E5RHQ5 1161 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 H3BUI4 141 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 IGLV1-47P01700 117 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 GLAP06280 429 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 ATAD3CQ5T2N8 411 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 BAIAP2L2Q6UXY1 529 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 ZNF497Q6ZNH5 498 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 LIAT1Q6ZQX7 453 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 DYNAPQ8N1N2 210 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 OR10A7Q8NGE5 316 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 OR6M1Q8NGM8 313 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 ZNF596Q8TC21 504 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 FCGR1BQ92637 280 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 KIRREL1Q96J84 757 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 BEX1Q9HBH7 125 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 LRRC42Q9Y546 428 aa14.02□□□□□ -0.17
USP39-208ENST00000455732 CLPSL1A2RUU4 121 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 BPNT1O95861 308 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 VSIG8P0DPA2 414 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 GALP22466 123 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 PAX6P26367 422 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 CALRP27797 417 aaKnown RBP14.01□□□□□ -0.17
USP39-208ENST00000455732 HTR2CP28335 458 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 DYNLT3P51808 116 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 RBM39Q14498 530 aaKnown RBP14.01□□□□□ -0.17
USP39-208ENST00000455732 OLFML2AQ68BL7 652 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 DHRS7BQ6IAN0 325 aaPredicted RBP14.01□□□□□ -0.17
USP39-208ENST00000455732 GAPTQ8N292 157 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 PIFOQ8TCI5 191 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 MRGPRDQ8TDS7 321 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 NEK7Q8TDX7 302 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 WFDC12Q8WWY7 111 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 GFI1Q99684 422 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 ZNF286AQ9HBT8 521 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 WNK1Q9H4A3 2382 aa14.01□□□□□ -0.17
USP39-208ENST00000455732 MCRIP1C9JLW8 97 aa14□□□□□ -0.17
USP39-208ENST00000455732 SLC17A2O00624 439 aa14□□□□□ -0.17
USP39-208ENST00000455732 CA11O75493 328 aa14□□□□□ -0.17
USP39-208ENST00000455732 GZMHP20718 246 aa14□□□□□ -0.17
USP39-208ENST00000455732 FUT3P21217 361 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms