RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 HMG20AQ9NP66 347 aa14.58□□□□□ -0.07
COPS7A-202ENST00000455113 IL36RNQ9UBH0 155 aa14.58□□□□□ -0.07
COPS7A-202ENST00000455113 FAM96BQ9Y3D0 163 aa14.58□□□□□ -0.07
COPS7A-202ENST00000455113 SNU13P55769 128 aaKnown RBP14.58□□□□□ -0.08
COPS7A-202ENST00000455113 COL10A1Q03692 680 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 DEFB112Q30KQ8 113 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 PIGYQ3MUY2 71 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 NCR3LG1Q68D85 454 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 LINC00299Q6ZSB3 139 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 OR51T1Q8NGJ9 327 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 OR5D13Q8NGL4 314 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 S100A16Q96FQ6 103 aaKnown RBP14.58□□□□□ -0.08
COPS7A-202ENST00000455113 DIRAS2Q96HU8 199 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 Q96M66 194 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 NICN1Q9BSH3 213 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 ST3GAL6Q9Y274 331 aa14.58□□□□□ -0.08
COPS7A-202ENST00000455113 METTL21EPA6NDL7 271 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 RBM11P57052 281 aaKnown RBP14.57□□□□□ -0.08
COPS7A-202ENST00000455113 TUSC1Q2TAM9 212 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 CNIH2Q6PI25 160 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 DTX3Q8N9I9 347 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 PPP1R35Q8TAP8 253 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 TM2D1Q9BX74 207 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 EXTL2Q9UBQ6 330 aa14.57□□□□□ -0.08
COPS7A-202ENST00000455113 A0A0A6YYD4 124 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 CLDN34H7C241 214 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 K7N7A8 449 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 VEGFCP49767 419 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 EDDM3BP56851 147 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 FAM189A2Q15884 450 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 TAF9Q16594 264 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 NHLRC3Q5JS37 347 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 SPIN3Q5JUX0 258 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 OR4M1Q8NGD0 313 aa14.56□□□□□ -0.08
COPS7A-202ENST00000455113 MDFIC2A0A1B0GVS7 189 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 GEMIN2O14893 280 aaKnown RBP14.55□□□□□ -0.08
COPS7A-202ENST00000455113 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
COPS7A-202ENST00000455113 HAND1O96004 215 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 GABRR1P24046 479 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 CDK2P24941 298 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 TALDO1P37837 337 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 LSAMPQ13449 338 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 MADCAM1Q13477 382 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 SLC9A3R2Q15599 337 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 MOGAT2Q3SYC2 334 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 CCDC190Q86UF4 302 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 FAM89BQ8N5H3 189 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 PHF21AQ96BD5 680 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 SNX22Q96L94 193 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 C19orf12Q9NSK7 152 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 SOX21Q9Y651 276 aaPredicted RBP14.55□□□□□ -0.08
COPS7A-202ENST00000455113 HAX1O00165 279 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 RAB27BO00194 218 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 SH2D1BO14796 132 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 RNASE1P07998 156 aaKnown RBP14.55□□□□□ -0.08
COPS7A-202ENST00000455113 DUSP1P28562 367 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 Q6YL49 198 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 IZUMO1Q8IYV9 350 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 OR8H2Q8N162 312 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 Q8N7P7 452 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 OR56B1Q8NGI3 324 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 TSC22D3Q99576 134 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 PRDM13Q9H4Q3 707 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 DIABLOQ9NR28 239 aa14.55□□□□□ -0.08
COPS7A-202ENST00000455113 TMEM89A2RUT3 159 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 SOCS1O15524 211 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 UBE2E1P51965 193 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 FOXL1Q12952 345 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 ZNF146Q15072 292 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 SPANXN2Q5MJ10 180 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 RAB12Q6IQ22 244 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 OR10R2Q8NGX6 335 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 SSMEM1Q8WWF3 244 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 UNKLQ9H9P5 680 aaKnown RBP14.54□□□□□ -0.08
COPS7A-202ENST00000455113 SEBOXQ9HB31 216 aaPredicted RBP14.54□□□□□ -0.08
COPS7A-202ENST00000455113 ZNF581Q9P0T4 197 aa14.54□□□□□ -0.08
COPS7A-202ENST00000455113 FABP12A6NFH5 140 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 RNASEK-C17orf49H0YIS7 233 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 XRCC3O43542 346 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 SCGNO76038 276 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 OR7C1O76099 320 aaPredicted RBP14.53□□□□□ -0.08
COPS7A-202ENST00000455113 CRYBA1P05813 215 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 FBP1P09467 338 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 BLVRBP30043 206 aaPredicted RBP14.53□□□□□ -0.08
COPS7A-202ENST00000455113 IL13RA2Q14627 380 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 TMEM69Q5SWH9 247 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 TMEM200BQ69YZ2 307 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 SIGIRRQ6IA17 410 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 C16orf87Q6PH81 154 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 HEXA-AS1Q9H8Q6 139 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 AKIP1Q9NQ31 210 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 TNFRSF19Q9NS68 423 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 POMT1Q9Y6A1 747 aa14.53□□□□□ -0.08
COPS7A-202ENST00000455113 A0A0A6YYH2 397 aa14.52□□□□□ -0.08
COPS7A-202ENST00000455113 A0A0U1RQK1 487 aa14.52□□□□□ -0.08
COPS7A-202ENST00000455113 FAM90A10PA6NDY2 464 aa14.52□□□□□ -0.08
COPS7A-202ENST00000455113 BTBD17A6NE02 478 aa14.52□□□□□ -0.08
COPS7A-202ENST00000455113 FAM90A18PA6NE21 464 aa14.52□□□□□ -0.08
COPS7A-202ENST00000455113 FAM90A16PA6NEW6 464 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms