RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 HPS1Q92902 700 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 SDSLQ96GA7 329 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 SNX22Q96L94 193 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 GAFA1Q96PS6 74 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 SLC25A21Q9BQT8 299 aaPredicted RBP5.01□□□□□ -1.61
SDC4P-201ENST00000453285 C20orf85Q9H1P6 137 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 GHITMQ9H3K2 345 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 ZNF286AQ9HBT8 521 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 MBNL3Q9NUK0 354 aaKnown RBP5.01□□□□□ -1.61
SDC4P-201ENST00000453285 TMEM106BQ9NUM4 274 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 NUDT15Q9NV35 164 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 DNAJB11Q9UBS4 358 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 DUX4Q9UBX2 424 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 SCP2D1Q9UJQ7 156 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 ZNF221Q9UK13 617 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 ALG5Q9Y673 324 aa5.01□□□□□ -1.61
SDC4P-201ENST00000453285 USP9YO00507 2555 aaPredicted RBP5.01□□□□□ -1.61
SDC4P-201ENST00000453285 COL12A1Q99715 3063 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PPIAL4EA0A075B759 164 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 A0A0A6YYJ9 748 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TRAV39A0A0B4J263 110 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 IGHV1-69-2A0A0G2JMI3 117 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 C7orf66A4D0T2 115 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 OR5H14A6NHG9 310 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 LRRC30A6NM36 301 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TRDCB7Z8K6 153 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PPIAL4DF5H284 164 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 LYNX1G3V0Z9 82 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 H7C1Q1 480 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 ARPC1BO15143 372 aaKnown RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 PEX14O75381 377 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 RP2O75695 350 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CLDN1O95832 211 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 DHFRP00374 187 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 GYPAP02724 150 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TK1P04183 234 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 IL5P05113 134 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PPIAL4FP0DN26 164 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 LYNX1P0DP58 116 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 SELLP14151 372 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 IRF2P14316 349 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 GABRA2P47869 451 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 OR3A3P47888 321 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 GLIPR1P48060 266 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 KCNJ3P48549 501 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 RAB25P57735 213 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TLE4Q04727 773 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 AESQ08117 197 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 HMGN3Q15651 99 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CARTPTQ16568 116 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TATDN3Q17R31 274 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CR1LQ2VPA4 569 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CHRFAM7AQ494W8 412 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 SCGB2B2Q4G0G5 96 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 IGSF11Q5DX21 431 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PEG10Q86TG7 708 aaKnown RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 ZNF561Q8N587 486 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 ZNRF1Q8ND25 227 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 DEFB108BQ8NET1 73 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TERB2Q8NHR7 220 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CCDC107Q8WV48 283 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 GIMAP1Q8WWP7 306 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CCL17Q92583 94 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CCL13Q99616 98 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PRRT1Q99946 306 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 VRK1Q99986 396 aaPredicted RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 NEURL2Q9BR09 285 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 GINS4Q9BRT9 223 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 ALX4Q9H161 411 aaPredicted RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 NCOR1P1Q9H4R4 102 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 ZNF665Q9H7R5 613 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PLEKHF2Q9H8W4 249 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 CHMP1AQ9HD42 196 aaPredicted RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 MYOZ1Q9NP98 299 aaPredicted RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 NECAP2Q9NVZ3 263 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 EHFQ9NZC4 300 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 KIF25Q9UIL4 384 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 FBXO9Q9UK97 447 aaPredicted RBP5□□□□□ -1.61
SDC4P-201ENST00000453285 GPR132Q9UNW8 380 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 VSIG4Q9Y279 399 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 PPIAL4AQ9Y536 164 aa5□□□□□ -1.61
SDC4P-201ENST00000453285 TRAV38-1A0A0B4J264 116 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 KIR2DS1A0A191URI9 304 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 TMEM30CPA0ZSE6 113 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 HMX3A6NHT5 357 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 OVOL3O00110 214 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 MGST3O14880 152 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 SIGLEC5O15389 551 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 FABP7O15540 132 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 TUSC2O75896 110 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 LY6HO94772 140 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 FSTL3O95633 263 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 IFNA6P05013 189 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 OR5H8P0DN80 308 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 CGB3P0DN86 165 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 CGB7P0DN87 165 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 PLA2G2AP14555 144 aa4.99□□□□□ -1.61
SDC4P-201ENST00000453285 ANXA7P20073 488 aaKnown RBP4.99□□□□□ -1.61
SDC4P-201ENST00000453285 ERP29P30040 261 aaKnown RBP4.99□□□□□ -1.61
SDC4P-201ENST00000453285 KIR2DS4P43632 304 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms