RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RUNX1Q01196 453 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 CFHR3Q02985 330 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 SCN1BQ07699 218 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 HNF4GQ14541 408 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 CDK5R1Q15078 307 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 DEFB136Q30KP8 78 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 Q3ZCU0 254 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 BCDIN3DQ7Z5W3 292 aaKnown RBP11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 OR10H4Q8NGA5 316 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 OR52M1Q8NGK5 317 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 FGGYQ96C11 551 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 IL4I1Q96RQ9 567 aa11.18□□□□□ -0.62
LYSMD3-202ENST00000453259 H3BSH0 61 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 IL3RAP26951 378 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 CD1BP29016 333 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 ATP6V1E1P36543 226 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 KIR3DL2P43630 455 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 DAPP51397 102 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 IL13RA2Q14627 380 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 PAN3Q58A45 887 aaKnown RBP11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 LINC00311Q8N616 119 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 Q8N9W7 124 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 MYCBPQ99417 103 aaPredicted RBP11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 TBX5Q99593 518 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 RASL11BQ9BPW5 248 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 KIF25Q9UIL4 384 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 GNG8Q9UK08 70 aa11.17□□□□□ -0.62
LYSMD3-202ENST00000453259 H0YJX3 145 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 LY86O95711 162 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 MOSP00540 346 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 GZMHP20718 246 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 SOX6P35712 828 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 FLOT2Q14254 428 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 UTF1Q5T230 341 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 FAM71E2Q8N5Q1 922 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 PXT1Q8NFP0 134 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 OR8J1Q8NGP2 316 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 CNIH3Q8TBE1 160 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 FAM118AQ9NWS6 357 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 NKX1-2Q9UD57 310 aaPredicted RBP11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 MYRFQ9Y2G1 1151 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 DNAH7Q8WXX0 4024 aa11.16□□□□□ -0.62
LYSMD3-202ENST00000453259 TCRBV3S1A0A5B6 114 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 LINC01548A6NM66 108 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 ATP8B1O43520 1251 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 TMEM225BP0DP42 221 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 ZP1P60852 638 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 ZNF616Q08AN1 781 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 DIAPH2-AS1Q14236 149 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 KISS1Q15726 138 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 TMEM30BQ3MIR4 351 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 RSBN1Q5VWQ0 802 aaPredicted RBP11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 SPATA24Q86W54 205 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 TMEM104Q8NE00 496 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 OR5D14Q8NGL3 314 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 OR13C3Q8NGS6 347 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 OR13C9Q8NGT0 318 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 RFT1Q96AA3 541 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 S1PR3Q99500 378 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 ZCCHC4Q9H5U6 513 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 RAB9BQ9NP90 201 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 PLSCR3Q9NRY6 295 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 ING3Q9NXR8 418 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 FRRS1LQ9P0K9 344 aa11.15□□□□□ -0.62
LYSMD3-202ENST00000453259 TRAV24A0A0B4J272 114 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 M0R129 80 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 SULT1B1O43704 296 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 GNG10P50151 68 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 TMEM65Q6PI78 240 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 SERPINA12Q8IW75 414 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 LEAP2Q969E1 77 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 RNF166Q96A37 237 aaPredicted RBP11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 RNFT2Q96EX2 444 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 MRPL48Q96GC5 212 aaKnown RBP11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 THTPAQ9BU02 230 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 IFT22Q9H7X7 185 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 VSIG4Q9Y279 399 aa11.14□□□□□ -0.63
LYSMD3-202ENST00000453259 G3V2T6 193 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 I3L521 148 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 SLC16A6O15403 523 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 HCKP08631 526 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 EPHA2P29317 976 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 SSTR5P35346 364 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 ZNF137PP52743 207 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 TP53I3Q53FA7 332 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms