RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MRPS18AQ9NVS2 196 aaKnown RBP21.54■■□□□ 1.04
USP42-204ENST00000451154 ZNF581Q9P0T4 197 aa21.54■■□□□ 1.04
USP42-204ENST00000451154 MOB4Q9Y3A3 225 aa21.54■■□□□ 1.04
USP42-204ENST00000451154 AMMECR1Q9Y4X0 333 aaPredicted RBP21.54■■□□□ 1.04
USP42-204ENST00000451154 HSPE1-MOB4S4R3N1 261 aa21.54■■□□□ 1.04
USP42-204ENST00000451154 HTR3BO95264 441 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 IL1AP01583 271 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 LIMS3P0CW19 117 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 LIMS4P0CW20 117 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 IL13RA2Q14627 380 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 OSR2Q8N2R0 312 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 JAM3Q9BX67 310 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 FAM118AQ9NWS6 357 aa21.53■■□□□ 1.04
USP42-204ENST00000451154 NPIPB11E5RHQ5 1161 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 CDRT1O95170 752 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 GNG10P50151 68 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 SLC35A2P78381 396 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 HNF4GQ14541 408 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 KLHL22Q53GT1 634 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 ASCL4Q6XD76 172 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 ZNF329Q86UD4 541 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 Q8NFD4 153 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 APH1BQ8WW43 257 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 CPNE2Q96FN4 548 aaPredicted RBP21.52■■□□□ 1.04
USP42-204ENST00000451154 PCDHB16Q9NRJ7 776 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 ING4Q9UNL4 249 aa21.52■■□□□ 1.04
USP42-204ENST00000451154 A0A1W2PPI3 338 aa21.51■■□□□ 1.03
USP42-204ENST00000451154 PSMB11A5LHX3 300 aa21.51■■□□□ 1.03
USP42-204ENST00000451154 MADCAM1Q13477 382 aa21.51■■□□□ 1.03
USP42-204ENST00000451154 HES1Q14469 280 aa21.51■■□□□ 1.03
USP42-204ENST00000451154 SMN1Q16637 294 aaKnown RBP21.51■■□□□ 1.03
USP42-204ENST00000451154 XAF1Q6GPH4 301 aa21.51■■□□□ 1.03
USP42-204ENST00000451154 GPR148Q8TDV2 347 aa21.51■■□□□ 1.03
USP42-204ENST00000451154 A0A1W2PPE3 182 aa21.5■■□□□ 1.03
USP42-204ENST00000451154 SSTR5P35346 364 aa21.5■■□□□ 1.03
USP42-204ENST00000451154 SUMF2Q8NBJ7 301 aa21.5■■□□□ 1.03
USP42-204ENST00000451154 DPCDQ9BVM2 203 aaPredicted RBP21.5■■□□□ 1.03
USP42-204ENST00000451154 ST3GAL6Q9Y274 331 aa21.5■■□□□ 1.03
USP42-204ENST00000451154 COL7A1Q02388 2944 aa21.5■■□□□ 1.03
USP42-204ENST00000451154 TMEM11P17152 192 aa21.49■■□□□ 1.03
USP42-204ENST00000451154 ETV1P50549 477 aa21.49■■□□□ 1.03
USP42-204ENST00000451154 KRTAP10-11P60412 298 aa21.49■■□□□ 1.03
USP42-204ENST00000451154 RPL22L1Q6P5R6 122 aaKnown RBP21.49■■□□□ 1.03
USP42-204ENST00000451154 C10orf67Q8IYJ2 551 aa21.49■■□□□ 1.03
USP42-204ENST00000451154 HAVCR2Q8TDQ0 301 aa21.49■■□□□ 1.03
USP42-204ENST00000451154 RCC1LQ96I51 464 aaKnown RBP21.49■■□□□ 1.03
USP42-204ENST00000451154 NOL4LQ96MY1 436 aaPredicted RBP21.49■■□□□ 1.03
USP42-204ENST00000451154 S100A14Q9HCY8 104 aa21.49■■□□□ 1.03
USP42-204ENST00000451154 FGF20Q9NP95 211 aaPredicted RBP21.49■■□□□ 1.03
USP42-204ENST00000451154 SIRT4Q9Y6E7 314 aaPredicted RBP21.49■■□□□ 1.03
USP42-204ENST00000451154 K7EIL1 84 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 CD2P06729 351 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 KCNJ3P48549 501 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 PAX5Q02548 391 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 OR2G6Q5TZ20 316 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 C5orf56Q8N8D9 126 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 OR10X1Q8NGY0 326 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 METTL9Q9H1A3 318 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 LINC00527Q9UJ94 153 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 ZNF281Q9Y2X9 895 aa21.48■■□□□ 1.03
USP42-204ENST00000451154 WBP4O75554 376 aaKnown RBP21.47■■□□□ 1.03
USP42-204ENST00000451154 OR7C1O76099 320 aaPredicted RBP21.47■■□□□ 1.03
USP42-204ENST00000451154 CLIC3O95833 236 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 RAB7AP51149 207 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 CCDC58Q4VC31 144 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 SLC16A12Q6ZSM3 486 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 OR10A7Q8NGE5 316 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 TMEM106AQ96A25 262 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 ORAI1Q96D31 301 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 TMEM138Q9NPI0 162 aa21.47■■□□□ 1.03
USP42-204ENST00000451154 IGKV1D-33P01593 117 aa21.46■■□□□ 1.03
USP42-204ENST00000451154 IGKV1-33P01594 117 aa21.46■■□□□ 1.03
USP42-204ENST00000451154 ZNF93P35789 620 aaPredicted RBP21.46■■□□□ 1.03
USP42-204ENST00000451154 OR8H3Q8N146 312 aa21.46■■□□□ 1.03
USP42-204ENST00000451154 LINC00482Q8N8I6 264 aa21.46■■□□□ 1.03
USP42-204ENST00000451154 OR52N1Q8NH53 320 aa21.46■■□□□ 1.03
USP42-204ENST00000451154 GEMIN2O14893 280 aaKnown RBP21.45■■□□□ 1.02
USP42-204ENST00000451154 GZMHP20718 246 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 RBM11P57052 281 aaKnown RBP21.45■■□□□ 1.02
USP42-204ENST00000451154 DEFB121Q5J5C9 76 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 DDI2Q5TDH0 399 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 C18orf65Q6ZTR6 163 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 PQLC1Q8N2U9 271 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 UBALD1Q8TB05 177 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 CCDC107Q8WV48 283 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 IFT22Q9H7X7 185 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 IL36GQ9NZH8 169 aa21.45■■□□□ 1.02
USP42-204ENST00000451154 WI2-2373I1.2A0A1W2PRP0 233 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 SERPINE3A8MV23 424 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 DUS4LO95620 317 aaKnown RBP21.44■■□□□ 1.02
USP42-204ENST00000451154 CSTBP04080 98 aaKnown RBP21.44■■□□□ 1.02
USP42-204ENST00000451154 SERPINA2P20848 420 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 BDKRB2P30411 391 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 HOXD3P31249 432 aaPredicted RBP21.44■■□□□ 1.02
USP42-204ENST00000451154 REG1BP48304 166 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 RPL23AP62750 156 aaKnown RBP21.44■■□□□ 1.02
USP42-204ENST00000451154 PPP3R1P63098 170 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 NHLRC3Q5JS37 347 aa21.44■■□□□ 1.02
USP42-204ENST00000451154 FAM53AQ6NSI3 398 aaPredicted RBP21.44■■□□□ 1.02
USP42-204ENST00000451154 TMPRSS11AQ6ZMR5 421 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms