RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MBD3L1Q8WWY6 194 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 TNFRSF14Q92956 283 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 DDIT4LQ96D03 193 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 SMIM10Q96HG1 83 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PBOV1Q9GZY1 135 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 ZBP1Q9H171 429 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 LYRM4Q9HD34 91 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.46□□□□□ -1.22
LSM5-208ENST00000450169 SERGEFQ9UGK8 458 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 ANXA10Q9UJ72 324 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 SH3BGRL2Q9UJC5 107 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 NXT1Q9UKK6 140 aaKnown RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 MCTS1Q9ULC4 181 aaKnown RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 SPACA6W5XKT8 324 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 DOCK9Q9BZ29 2069 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 OBSL1O75147 1896 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 A0A0U1RQK1 487 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 NKX2-6A6NCS4 301 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 WDR1O75083 606 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 MMP23AO75900 390 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 HLA-HP01893 362 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 AADACP22760 399 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 HINT1P49773 126 aaPredicted RBP7.45□□□□□ -1.22
LSM5-208ENST00000450169 BLKP51451 505 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 FXYD4P59646 89 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 SHBQ15464 509 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 EXT1Q16394 746 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 ERN2Q76MJ5 926 aaKnown RBP7.45□□□□□ -1.22
LSM5-208ENST00000450169 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 C1orf174Q8IYL3 243 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 OR56B2PQ8NGI1 322 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 OR14C36Q8NHC7 312 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 BAHD1Q8TBE0 780 aaPredicted RBP7.45□□□□□ -1.22
LSM5-208ENST00000450169 ARRDC3Q96B67 414 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 SMIM12Q96EX1 92 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 LOXL4Q96JB6 756 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 BTF3L4Q96K17 158 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 VSTM2LQ96N03 204 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 FBRSQ9HAH7 460 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 BET1LQ9NYM9 111 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 TBX21Q9UL17 535 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 DOCK8Q8NF50 2099 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 TRAV34A0A0B4J273 112 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 A0A1W2PNV4 684 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 OR6C6A6NF89 314 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 ZNF891A8MT65 544 aaPredicted RBP7.45□□□□□ -1.22
LSM5-208ENST00000450169 CYR61O00622 381 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 ZNF737O75373 536 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 IFNA5P01569 189 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 ESDP10768 282 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 MPLP40238 635 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 SLC6A8P48029 635 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 CD226Q15762 336 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 FAM78BQ5VT40 261 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 KLHL24Q6TFL4 600 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 CBLN3Q6UW01 205 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 COMMD2Q86X83 199 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 OR51E1Q8TCB6 317 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 DYRK2Q92630 601 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 GPR146Q96CH1 333 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 OR10A5Q9H207 317 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 PARLQ9H300 379 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 PLA2G3Q9NZ20 509 aa7.45□□□□□ -1.22
LSM5-208ENST00000450169 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF850A8MQ14 1090 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 RNF212BA8MTL3 300 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TNFSF12O43508 249 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SERF1AO75920 110 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF205O95201 554 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TMEM50AO95807 157 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 PRNPP04156 253 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 ADMP35318 185 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 LINC00310P59036 64 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 RPS20P60866 119 aaKnown RBP7.44□□□□□ -1.22
LSM5-208ENST00000450169 PPP1CBP62140 327 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 PDGFRLQ15198 375 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 MSMO1Q15800 293 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 VAMP3Q15836 100 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 PRSS41Q7RTY9 318 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 BCORP1Q8N888 145 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SLC38A9Q8NBW4 561 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 PLPPR1Q8TBJ4 325 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 RNF133Q8WVZ7 376 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 STARD4Q96DR4 205 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 HDHD3Q9BSH5 251 aaPredicted RBP7.44□□□□□ -1.22
LSM5-208ENST00000450169 RSG1Q9BU20 258 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 VN1R3Q9BXE9 311 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SAMD10Q9BYL1 202 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TXNIPQ9H3M7 391 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 VSIRQ9H7M9 311 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF160Q9HCG1 818 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SLC35D1Q9NTN3 355 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 NECAP2Q9NVZ3 263 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TP53TG3Q9ULZ0 132 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TRPM6Q9BX84 2022 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 FREM3P0C091 2139 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 RANBP2P49792 3224 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms