RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	KLF13	Q9Y2Y9	288 aa	Predicted RBP	14.46	□□□□□ -0.1
TOM1-210	ENST00000449058	AHCTF1	Q8WYP5	2266 aa		14.46	□□□□□ -0.1
TOM1-210	ENST00000449058	DNAJC13	O75165	2243 aa		14.46	□□□□□ -0.1
TOM1-210	ENST00000449058	MED13	Q9UHV7	2174 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	MEX3A	A1L020	520 aa	Known RBP	14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	ANKRD30BL	A7E2S9	258 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	C1QL1	O75973	258 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	PPT1	P50897	306 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	GUK1	Q16774	197 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	ZNF573	Q86YE8	665 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	SAV1	Q9H4B6	383 aa	Predicted RBP	14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	IL17B	Q9UHF5	180 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058		K7N7A8	449 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	ADAM20	O43506	726 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	PITX3	O75364	302 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	IL18BP	O95998	194 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	GNG3	P63215	75 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	IL24	Q13007	206 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	ZNF880	Q6PDB4	577 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	C20orf204	Q6ZNR8	217 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	SUMF1	Q8NBK3	374 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	RXFP4	Q8TDU9	374 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	ZNF488	Q96MN9	340 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	GPHA2	Q96T91	129 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	PLEKHF2	Q9H8W4	249 aa		14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	LYRM2	Q9NU23	88 aa	Predicted RBP	14.45	□□□□□ -0.1
TOM1-210	ENST00000449058	TRAV24	A0A0B4J272	114 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	COLCA2	A8K830	154 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	HSD17B6	O14756	317 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	SLC34A2	O95436	690 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	MT-CO3	P00414	261 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	VDAC1	P21796	283 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	PAX6	P26367	422 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	APLNR	P35414	380 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	HIKESHI	Q53FT3	197 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	CXorf66	Q5JRM2	361 aa	Predicted RBP	14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	OR5D13	Q8NGL4	314 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	OR1K1	Q8NGR3	316 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	PLPPR1	Q8TBJ4	325 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	IL22RA2	Q969J5	263 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	LIPG	Q9Y5X9	500 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058		H0Y980	276 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	KLRC4-KLRK1	H3BQV0	150 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	SP9	P0CG40	484 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	ASCL1	P50553	236 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	ID3	Q02535	119 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	ZNF266	Q14584	549 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	LINC00518	Q8N0U6	118 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	FAM58A	Q8N1B3	248 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	KDF1	Q8NAX2	398 aa	Predicted RBP	14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	BCL2L2	Q92843	193 aa	Predicted RBP	14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	IP6K3	Q96PC2	410 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	PKIB	Q9C010	78 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	IFT22	Q9H7X7	185 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	SMCO4	Q9NRQ5	59 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	ZNF175	Q9Y473	711 aa		14.44	□□□□□ -0.1
TOM1-210	ENST00000449058	PGLYRP1	O75594	196 aa	Predicted RBP	14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	PRH1	P02810	166 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	CRYBA1	P05813	215 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	MMP9	P14780	707 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	RAB13	P51153	203 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	CLN3	Q13286	438 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	ESPL1	Q14674	2120 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	PLA2G2C	Q5R387	149 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	AVPI1	Q5T686	147 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	ZNF324B	Q6AW86	544 aa	Predicted RBP	14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	CMTM1	Q8IZ96	169 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	TMEM252	Q8N6L7	170 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	ZFP62	Q8NB50	900 aa	Predicted RBP	14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	SLC25A31	Q9H0C2	315 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	OR51I2	Q9H344	312 aa		14.43	□□□□□ -0.1
TOM1-210	ENST00000449058	PROB1	E7EW31	1015 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	SSSCA1	O60232	199 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	SLC10A1	Q14973	349 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	TMEM182	Q6ZP80	229 aa	Predicted RBP	14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	ODF3L1	Q8IXM7	274 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	MAGT1	Q9H0U3	335 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	GP6	Q9HCN6	339 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058		A0A1B0GW64	132 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	CDX4	O14627	284 aa	Predicted RBP	14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	HS3ST1	O14792	307 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	TMEM50A	O95807	157 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	CLINT1	Q14677	625 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	H1FOO	Q8IZA3	346 aa	Predicted RBP	14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	TMEM171	Q8WVE6	324 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	RDH5	Q92781	318 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	CABLES2	Q9BTV7	478 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	C12orf49	Q9H741	205 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	DLL3	Q9NYJ7	618 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	OR2W1	Q9Y3N9	320 aa		14.42	□□□□□ -0.1
TOM1-210	ENST00000449058	HLA-DRB3	P79483	266 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	FBXW9	Q5XUX1	488 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	ETV3L	Q6ZN32	361 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	C17orf78	Q8N4C9	275 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	FER1L6-AS2	Q96M78	137 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	EGLN1	Q9GZT9	426 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	EIF5A2	Q9GZV4	153 aa	Known RBP	14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	GLRX2	Q9NS18	164 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	WDFY4	Q6ZS81	3184 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	FOLR2	P14207	255 aa		14.41	□□□□□ -0.1

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