RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ISL2Q96A47 359 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 YAE1D1Q9NRH1 226 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 DMRT1Q9Y5R6 373 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 F11RQ9Y624 299 aaKnown RBP7.96□□□□□ -1.13
NIPBL-202ENST00000448238 VDAC1P21796 283 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 TNFAIP6P98066 277 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-202ENST00000448238 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 ARHGAP23Q9P227 1491 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 MST1RQ04912 1400 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 DUTP33316 252 aaKnown RBP7.96□□□□□ -1.14
NIPBL-202ENST00000448238 TMEM170BQ5T4T1 132 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 OR4A5Q8NH83 315 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 ORAOV1Q8WV07 137 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 SCNM1Q9BWG6 230 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 HOXA5P20719 270 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF137PP52743 207 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 NTHL1P78549 312 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 NFAM1Q8NET5 270 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-202ENST00000448238 DOK1Q99704 481 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF430Q9H8G1 570 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-202ENST00000448238 HSPB7Q9UBY9 170 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 TNS2Q63HR2 1409 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 HTR6P50406 440 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 RNFT1Q5M7Z0 435 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 MORN1Q5T089 497 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 IBA57Q5T440 356 aaKnown RBP7.96□□□□□ -1.14
NIPBL-202ENST00000448238 KLRG1Q96E93 195 aa7.96□□□□□ -1.14
NIPBL-202ENST00000448238 SFT2D2O95562 160 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 CYB5R3P00387 301 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-202ENST00000448238 TNXAQ16473 311 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 TMEM108Q6UXF1 575 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 OR1F12Q8NHA8 337 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 PAXXQ9BUH6 204 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 IL25Q9H293 177 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 GPR35Q9HC97 309 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 FMODQ06828 376 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 C5orf30Q96GV9 206 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 HIGD1AQ9Y241 93 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 ROS1P08922 2347 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 OR2A4O95047 310 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 IGHV3-9P01782 118 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 CDKN2AP42771 156 aaKnown RBP7.95□□□□□ -1.14
NIPBL-202ENST00000448238 NUTF2P61970 127 aaKnown RBP7.95□□□□□ -1.14
NIPBL-202ENST00000448238 HBBP68871 147 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 ERV3-1Q14264 604 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 LINC00303Q3SY05 128 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 ZBTB34Q8NCN2 500 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 OR2A7Q96R45 310 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 VN1R1Q9GZP7 353 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 KLK11Q9UBX7 282 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 AMY1AP04745 511 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 C16orf82Q7Z2V1 217 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 OR1P1Q8NH06 330 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 SORT1Q99523 831 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 HAPLN2Q9GZV7 340 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 GFRA2O00451 464 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 APOMO95445 188 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 FBXO46Q6PJ61 603 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-202ENST00000448238 LAT2Q9GZY6 243 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 GLIPR2Q9H4G4 154 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 HINT3Q9NQE9 182 aaKnown RBP7.95□□□□□ -1.14
NIPBL-202ENST00000448238 NBASA2RRP1 2371 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 WNT7AO00755 349 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 DAOP14920 347 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 GALNSP34059 522 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 PPIAP62937 165 aaKnown RBP7.95□□□□□ -1.14
NIPBL-202ENST00000448238 PRICKLE4Q2TBC4 344 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 NKAIN2Q5VXU1 208 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF600Q6ZNG1 722 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 EMC6Q9BV81 110 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 PARP11Q9NR21 331 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 HSF4Q9ULV5 492 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 AVPR2P30518 371 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 FGF14Q92915 247 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 RAX2Q96IS3 184 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 GPR82Q96P67 336 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 IL17CQ9P0M4 197 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 INSIG2Q9Y5U4 225 aa7.95□□□□□ -1.14
NIPBL-202ENST00000448238 A0A1B0GU03 582 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 UNCXA6NJT0 531 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 CTSDP07339 412 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 MMP16P51512 607 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 DUSP2Q05923 314 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 FAM109BQ6ICB4 259 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SLC48A1Q6P1K1 146 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 BATF2Q8N1L9 274 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 GLIS1Q8NBF1 620 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 TRAF4Q9BUZ4 470 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 AKAP11Q9UKA4 1901 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 PXNP49023 591 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF770Q6IQ21 691 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 KAZALD1Q96I82 304 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 C6orf106Q9H6K1 298 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SRD5A2P31213 254 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 RPS4XP62701 263 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms