RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ZNF100Q8IYN0 542 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 SLC16A11Q8NCK7 471 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 FNDC9Q8TBE3 224 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 FAM213BQ8TBF2 198 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 TAAR6Q96RI8 345 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 PARP12Q9H0J9 701 aaKnown RBP11.33□□□□□ -0.6
DDX56-206ENST00000446987 PLK3Q9H4B4 646 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 GPR35Q9HC97 309 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 SERINC1Q9NRX5 453 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 DEPPQ9NTK1 212 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 GSKIPQ9P0R6 139 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 RHBDD3Q9Y3P4 386 aa11.33□□□□□ -0.6
DDX56-206ENST00000446987 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 WIPF3A6NGB9 483 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 IFNA21P01568 189 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 SELEP16581 610 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CYB561P49447 251 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 PMP22Q01453 160 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 IL13RA2Q14627 380 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 PRR22Q8IZ63 422 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 ERGIC1Q969X5 290 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 NKX3-1Q99801 234 aaPredicted RBP11.32□□□□□ -0.6
DDX56-206ENST00000446987 PROK2Q9HC23 129 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 ABI3Q9P2A4 366 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CLEC18AA5D8T8 446 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 FRG2CA6NGY1 282 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 PRSS47A8MTI9 375 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 WISP2O76076 250 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 BPNT1O95861 308 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CCL3P10147 92 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 FHITP49789 147 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 ZNF766Q5HY98 468 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 EMC4Q5J8M3 183 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 TEX43Q6ZNM6 134 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CENPVQ7Z7K6 275 aaPredicted RBP11.32□□□□□ -0.6
DDX56-206ENST00000446987 GVQW1Q8N7I0 195 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CYB561D1Q8N8Q1 229 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 PLPP7Q8NBV4 271 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CLEC18CQ8NCF0 446 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 OR4N2Q8NGD1 307 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 SPACA9Q96E40 222 aaPredicted RBP11.32□□□□□ -0.6
DDX56-206ENST00000446987 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 LMF2Q9BU23 707 aaKnown RBP11.32□□□□□ -0.6
DDX56-206ENST00000446987 RBKSQ9H477 322 aa11.32□□□□□ -0.6
DDX56-206ENST00000446987 CHCHD2Q9Y6H1 151 aaPredicted RBP11.32□□□□□ -0.6
DDX56-206ENST00000446987 PINLYPA6NC86 204 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 SP1P08047 785 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 KLK2P20151 261 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 CHRNB4P30926 498 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 HOXC12P31275 282 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 CSNK1A1P48729 337 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 MFGE8Q08431 387 aaPredicted RBP11.31□□□□□ -0.6
DDX56-206ENST00000446987 ZNF266Q14584 549 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 FAM189A2Q15884 450 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 PCK2Q16822 640 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 OR10G3Q8NGC4 313 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
DDX56-206ENST00000446987 TECTBQ96PL2 329 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 OR8B4Q96RC9 309 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 WFDC1Q9HC57 220 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 FLRT3Q9NZU0 649 aa11.31□□□□□ -0.6
DDX56-206ENST00000446987 NBASA2RRP1 2371 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 SYNGR4O95473 234 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 SCGB1D1O95968 90 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 TYMSP04818 313 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 PFN1P07737 140 aaKnown RBP11.3□□□□□ -0.6
DDX56-206ENST00000446987 GRPRP30550 384 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 RBMXP38159 391 aaKnown RBP11.3□□□□□ -0.6
DDX56-206ENST00000446987 ALDH3B1P43353 468 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 PTTG1IPP53801 180 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 FBXW4P57775 412 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 VAMP2P63027 116 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 UBE2V1Q13404 147 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 ZNF324BQ6AW86 544 aaPredicted RBP11.3□□□□□ -0.6
DDX56-206ENST00000446987 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 CLDND2Q8NHS1 167 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 RNF138Q8WVD3 245 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 P2RX4Q99571 388 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 TBL1XR1Q9BZK7 514 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 SMIM3Q9BZL3 60 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 ZMAT3Q9HA38 289 aaKnown RBP11.3□□□□□ -0.6
DDX56-206ENST00000446987 GPR84Q9NQS5 396 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 B3GALT5Q9Y2C3 310 aa11.3□□□□□ -0.6
DDX56-206ENST00000446987 CENPVL1A0A0U1RR11 272 aa11.29□□□□□ -0.6
DDX56-206ENST00000446987 IGKV1D-16P01601 117 aa11.29□□□□□ -0.6
DDX56-206ENST00000446987 MBPP02686 304 aaPredicted RBP11.29□□□□□ -0.6
DDX56-206ENST00000446987 NGFRP08138 427 aa11.29□□□□□ -0.6
DDX56-206ENST00000446987 UBE2NP61088 152 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms