RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 C1RLQ9NZP8 487 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 ZNF729A6NN14 1252 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-204ENST00000446876 MPIG6BO95866 241 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 CRYBA1P05813 215 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 CGB3P0DN86 165 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 CGB7P0DN87 165 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 CFPP27918 469 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 SSTR5P35346 364 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 KCNJ3P48549 501 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 RAG2P55895 527 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 FOXL1Q12952 345 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 P2RY14Q15391 338 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 SSX2Q16385 188 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 LTC4SQ16873 150 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 LRRC75BQ2VPJ9 315 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 RFESDQ8TAC1 157 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 UBALD1Q8TB05 177 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 CCDC107Q8WV48 283 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 DYRK2Q92630 601 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 MEGF9Q9H1U4 602 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 NDUFB11Q9NX14 153 aa12.01□□□□□ -0.49
HDAC4-204ENST00000446876 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
HDAC4-204ENST00000446876 TBL2Q9Y4P3 447 aaKnown RBP12.01□□□□□ -0.49
HDAC4-204ENST00000446876 KBTBD11-OT1A0A1B0GTJ5 212 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 TMEM30CPA0ZSE6 113 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 SLC22A1O15245 554 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 MRPS14O60783 128 aaKnown RBP12□□□□□ -0.49
HDAC4-204ENST00000446876 ARL6IP5O75915 188 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 IGHV3-7P01780 117 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 NFYBP25208 207 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 PSMB9P28065 219 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 HTR2CP28335 458 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 RAB13P51153 203 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 PAX5Q02548 391 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 FAM189A2Q15884 450 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 UBE2UQ5VVX9 321 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 SIGIRRQ6IA17 410 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 RAB12Q6IQ22 244 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 ABHD12Q8N2K0 398 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 C3orf56Q8N813 242 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 OR4P4Q8NGL7 312 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 NDNFQ8TB73 568 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 LEAP2Q969E1 77 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 MRPS24Q96EL2 167 aaKnown RBP12□□□□□ -0.49
HDAC4-204ENST00000446876 KIRREL1Q96J84 757 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 YTHDF1Q9BYJ9 559 aaKnown RBP12□□□□□ -0.49
HDAC4-204ENST00000446876 HILPDAQ9Y5L2 63 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 PEX16Q9Y5Y5 336 aa12□□□□□ -0.49
HDAC4-204ENST00000446876 SHISA3A0PJX4 238 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 HAX1O00165 279 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 IL1AP01583 271 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 CD37P11049 281 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 CLDN12P56749 244 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 UNC119Q13432 240 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 OR52W1Q6IF63 320 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 ZNF773Q6PK81 442 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 RTN4RL2Q86UN3 420 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 ZNF565Q8N9K5 539 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 OR6M1Q8NGM8 313 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 OR5R1Q8NH85 324 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 PIFOQ8TCI5 191 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 NICN1Q9BSH3 213 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 CST11Q9H112 138 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 NCOR1P1Q9H4R4 102 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 PLGRKTQ9HBL7 147 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 ETAA1Q9NY74 926 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 IDI2-AS1Q9NZ38 188 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 GHRLQ9UBU3 117 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 LRRC42Q9Y546 428 aa11.99□□□□□ -0.49
HDAC4-204ENST00000446876 UBE2QL1A1L167 161 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 MCRIP1C9JLW8 97 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 AIPO00170 330 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 CCRL2O00421 344 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 UBBP0CG47 229 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 CD34P28906 385 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 OR10A3P58181 314 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 QRFPP83859 136 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 NKAPLQ5M9Q1 402 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 DHRS7BQ6IAN0 325 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-204ENST00000446876 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-204ENST00000446876 ZNF497Q6ZNH5 498 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 GDPGP1Q6ZNW5 385 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 OR4K15Q8NH41 348 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 MALSU1Q96EH3 234 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 TMEM59Q9BXS4 323 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 SPACA1Q9HBV2 294 aa11.98□□□□□ -0.49
HDAC4-204ENST00000446876 A0A0A6YYD4 124 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 TRDV1A0A1B0GX56 115 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A10PA6NDY2 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A18PA6NE21 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A16PA6NEW6 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A20PA6NIJ5 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A7PA6NKC0 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A22PA8MWA6 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 TMEM14DPA8MWL7 114 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms