RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CMTM1Q8IZ96 169 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
ERCC3-203ENST00000445889 CPNE4Q96A23 557 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-203ENST00000445889 PRO1933Q9H354 126 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 ZNF576Q9H609 170 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 CALHM2Q9HA72 323 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 TMEM38BQ9NVV0 291 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 FABP4P15090 132 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 SRYQ05066 204 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 HERPUD1Q15011 391 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 RAB35Q15286 201 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 WIPI1Q5MNZ9 446 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-203ENST00000445889 LHFPL2Q6ZUX7 228 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 CARFQ8N187 725 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
ERCC3-203ENST00000445889 C19orf25Q9UFG5 118 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-203ENST00000445889 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
ERCC3-203ENST00000445889 UMODP07911 640 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 NR2C1P13056 603 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 HLA-BQ31612 363 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 OR2T2Q6IF00 324 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 IL1F10Q8WWZ1 152 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 TVP23CQ96ET8 276 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 FOXB1Q99853 325 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-203ENST00000445889 DSCR4P56555 118 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-203ENST00000445889 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-203ENST00000445889 C20orf204Q6ZNR8 217 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 IL22RA1Q8N6P7 574 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 RDH5Q92781 318 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 LYRM2Q9NU23 88 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-203ENST00000445889 TREM2Q9NZC2 230 aa12.21□□□□□ -0.45
ERCC3-203ENST00000445889 DSPP15924 2871 aaKnown RBP12.21□□□□□ -0.46
ERCC3-203ENST00000445889 PPP1R2P9O14990 202 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 PITX3O75364 302 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 IAPPP10997 89 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 MMP9P14780 707 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 MAS1LP35410 378 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 GAMTQ14353 236 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF880Q6PDB4 577 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 OR56B2PQ8NGI1 322 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 SSX3Q99909 188 aa12.21□□□□□ -0.46
ERCC3-203ENST00000445889 FGF23Q9GZV9 251 aaPredicted RBP12.21□□□□□ -0.46
ERCC3-203ENST00000445889 UNKLQ9H9P5 680 aaKnown RBP12.21□□□□□ -0.46
ERCC3-203ENST00000445889 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 SLC22A20A6NK97 555 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 GATCO43716 136 aaKnown RBP12.2□□□□□ -0.46
ERCC3-203ENST00000445889 TK1P04183 234 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 FUT6P51993 359 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 KIAA2026Q5HYC2 2103 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 MRPL14Q6P1L8 145 aaKnown RBP12.2□□□□□ -0.46
ERCC3-203ENST00000445889 UNQ6494/PRO21346Q6UXR6 183 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 VASH2Q86V25 355 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 RPS19BP1Q86WX3 136 aaKnown RBP12.2□□□□□ -0.46
ERCC3-203ENST00000445889 FRZBQ92765 325 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 C10orf35Q96D05 121 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF665Q9H7R5 613 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 LY6G6EA0A0G2JKS1 128 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 YKT6O15498 198 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 VAMP5O95183 116 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 CDS2O95674 445 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 TRGC1P0CF51 173 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 SSR4P51571 173 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 CLDND2Q8NHS1 167 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 ABHD5Q8WTS1 349 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 SIGLEC12Q96PQ1 595 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 SLC25A31Q9H0C2 315 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 U3KQA8 63 aa12.2□□□□□ -0.46
ERCC3-203ENST00000445889 IGHV1-45A0A0A0MS14 117 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 ARGFXA6NJG6 315 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF16P17020 682 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-203ENST00000445889 RAC1P63000 192 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 EIF3IQ13347 325 aaKnown RBP12.19□□□□□ -0.46
ERCC3-203ENST00000445889 FOXL2NBQ6ZUU3 175 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 CCDC54Q8NEL0 328 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 OR1K1Q8NGR3 316 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 CACNA1DQ01668 2161 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 A0A1B0GW64 132 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 RNF224P0DH78 156 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
ERCC3-203ENST00000445889 Q6ZRM9 215 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 RNASE11Q8TAA1 199 aaKnown RBP12.19□□□□□ -0.46
ERCC3-203ENST00000445889 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 PRDM13Q9H4Q3 707 aa12.19□□□□□ -0.46
ERCC3-203ENST00000445889 CD200P41217 278 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 GLIPR1P48060 266 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 PAX9P55771 341 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 CLDN15P56746 228 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 OR10D3Q8NH80 312 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 PLPPR1Q8TBJ4 325 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 SNX22Q96L94 193 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 A0A1B0GV90 55 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 OR6C6A6NF89 314 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 SYNGR1O43759 233 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms