RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.56
SSBP3-208ENST00000444533 NSD1Q96L73 2696 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-208ENST00000444533 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 MEX3AA1L020 520 aaKnown RBP11.57□□□□□ -0.56
SSBP3-208ENST00000444533 UBE2QL1A1L167 161 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 C17orf98A8MV24 154 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 PAHP00439 452 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 TFAP2AP05549 437 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 SLC2A2P11168 524 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-208ENST00000444533 ALDH3B2P48448 385 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 VEGFCP49767 419 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 UBE2E1P51965 193 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 RSBN1Q5VWQ0 802 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-208ENST00000444533 ZNF497Q6ZNH5 498 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 Q6ZTK2 550 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 USP43Q70EL4 1123 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 PDZD9Q8IXQ8 264 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 Q8N7P7 452 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 COQ2Q96H96 371 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 LPAR5Q9H1C0 372 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 ATG5Q9H1Y0 275 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 RIMS4Q9H426 269 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-208ENST00000444533 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 ETV7Q9Y603 341 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 SESN1Q9Y6P5 492 aa11.57□□□□□ -0.56
SSBP3-208ENST00000444533 A0A0A6YYJ9 748 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 KBTBD11-OT1A0A1B0GTJ5 212 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 SPINT2O43291 252 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 TCF21O43680 179 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 FSHBP01225 129 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 IGHV1-8P0DP01 117 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 HOXB4P17483 251 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-208ENST00000444533 CHATP28329 748 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 VBP1P61758 197 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 DYNC1I2Q13409 638 aaKnown RBP11.56□□□□□ -0.56
SSBP3-208ENST00000444533 KLF17Q5JT82 389 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-208ENST00000444533 HEPN1Q6WQI6 88 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 ZNF782Q6ZMW2 699 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-208ENST00000444533 PLPPR1Q8TBJ4 325 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 MRGPRDQ8TDS7 321 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 C22orf15Q8WYQ4 148 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 RAB3CQ96E17 227 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 NICN1Q9BSH3 213 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 ABRACLQ9P1F3 81 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 HSF4Q9ULV5 492 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 NAV3Q8IVL0 2385 aa11.56□□□□□ -0.56
SSBP3-208ENST00000444533 FN1P02751 2386 aaKnown RBP11.55□□□□□ -0.56
SSBP3-208ENST00000444533 TOR1AO14656 332 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 NPFFO15130 113 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 GABARAPO95166 117 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 MT-ND4P03905 459 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 CLEC2LP0C7M8 214 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 COX7A1P24310 79 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 CDK2P24941 298 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 RORCP51449 518 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 NCS1P62166 190 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 MIDNQ504T8 468 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 C6orf201Q7Z4U5 140 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 RTN4RL2Q86UN3 420 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 NR2C2APQ86WQ0 139 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 CLVS1Q8IUQ0 354 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-208ENST00000444533 PNKDQ8N490 385 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 FAM89BQ8N5H3 189 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 OR10A7Q8NGE5 316 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 RAB2BQ8WUD1 216 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 CCDC107Q8WV48 283 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 AP3S1Q92572 193 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 BCL7BQ9BQE9 202 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 FAAP24Q9BTP7 215 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 CALYQ9NYX4 217 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 ZNF581Q9P0T4 197 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 ZNF69Q9UC07 566 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 MGAT4AQ9UM21 535 aa11.55□□□□□ -0.56
SSBP3-208ENST00000444533 A0A0B4J203 849 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 MEIOCA2RUB1 952 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 BTBD17A6NE02 478 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 CCDC160A6NGH7 325 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 RNASEK-C17orf49H0YIS7 233 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 LDLRAD4O15165 306 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SOCS1O15524 211 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 ORC5O43913 435 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 ARG1P05089 322 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 FBP1P09467 338 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 CD3GP09693 182 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SNRPBP14678 240 aaKnown RBP11.54□□□□□ -0.56
SSBP3-208ENST00000444533 NFYBP25208 207 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SOX6P35712 828 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 TALDO1P37837 337 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 RPS19P39019 145 aaKnown RBP11.54□□□□□ -0.56
SSBP3-208ENST00000444533 PRRX1P54821 245 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 DLX6P56179 175 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 KLRD1Q13241 179 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 TMEM30BQ3MIR4 351 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 SIGIRRQ6IA17 410 aa11.54□□□□□ -0.56
SSBP3-208ENST00000444533 MOB1BQ7L9L4 216 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms