RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PSG5Q15238 335 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 C10orf113Q5VZT2 155 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 BHLHA15Q7RTS1 189 aaPredicted RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 CXorf67Q86X51 503 aaPredicted RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 MUC20Q8N307 709 aaPredicted RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 FLYWCH2Q96CP2 140 aaKnown RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 LRRC61Q9BV99 259 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 VN1R1Q9GZP7 353 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 DDX60LQ5H9U9 1706 aaKnown RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 HBZP02008 142 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 TAS2R60P59551 318 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 PKIAP61925 76 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ST3GAL2Q16842 350 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 PRSS36Q5K4E3 855 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 Q6ZNB5 142 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ASB5Q8WWX0 329 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 RAB37Q96AX2 223 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 TXNDC17Q9BRA2 123 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 DOK5Q9P104 306 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ING1Q9UK53 422 aaPredicted RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 TRAV34A0A0B4J273 112 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 C21orf140B9A014 251 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 TMEM33P57088 247 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 GBGT1Q8N5D6 347 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 SLIRPQ9GZT3 109 aaKnown RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 ZNF665Q9H7R5 613 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 DNPH1O43598 174 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ZNF735P0CB33 412 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 SLC35B1P78383 322 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 APOBEC4Q8WW27 367 aaKnown RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 CRISPLD2Q9H0B8 497 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ASCL3Q9NQ33 180 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 GPR27Q9NS67 375 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 IL19Q9UHD0 177 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 COX7A1P24310 79 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 RPS27P42677 84 aaKnown RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 FOXC1Q12948 553 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 PRICKLE4Q2TBC4 344 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 IFNL4K9M1U5 179 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 WNT9BO14905 357 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 MPDU1O75352 247 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 LYZL6O75951 148 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 MGPP08493 103 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 CRYBB2P43320 205 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 MEOX2P50222 304 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ZNF774Q6NX45 483 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ZNF683Q8IZ20 524 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 GMPPAQ96IJ6 420 aaPredicted RBP5.91□□□□□ -1.46
USP46-201ENST00000441222 RSG1Q9BU20 258 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 LTB4R2Q9NPC1 389 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 KCNE3Q9Y6H6 103 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 CASP8AP2Q9UKL3 1982 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 ARFGEF1Q9Y6D6 1849 aa5.91□□□□□ -1.46
USP46-201ENST00000441222 MYLKQ15746 1914 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 ANKRD20A5PA0PJZ0 165 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 MT-ND6P03923 174 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 LRRC75BQ2VPJ9 315 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 C12orf54Q6X4T0 127 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 MBD1Q9UIS9 605 aaPredicted RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 HMX2A2RU54 273 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 FAM90A27PA6NNH2 459 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 C3orf80F5H4A9 247 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 ETHE1O95571 254 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 PRR35P0CG20 571 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 GALNSP34059 522 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 SERF2P84101 59 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 EBLN2Q6P2I7 272 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 CCL4L1Q8NHW4 92 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 MRGPRDQ8TDS7 321 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 RAB33BQ9H082 229 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 CNTD2Q9H8S5 307 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 CNOT1A5YKK6 2376 aaKnown RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 THADAQ6YHU6 1953 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 CFDP00746 253 aaPredicted RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 HOXD4P09016 255 aaPredicted RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 OR2D3Q8NGH3 330 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 RFESDQ8TAC1 157 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 MRPL30Q8TCC3 161 aaKnown RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 ADAT3Q96EY9 351 aaPredicted RBP5.9□□□□□ -1.46
USP46-201ENST00000441222 MRAP2Q96G30 205 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 HARBI1Q96MB7 349 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 FOXQ1Q9C009 403 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 GHITMQ9H3K2 345 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 LRRK1Q38SD2 2015 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 PATJQ8NI35 1801 aa5.9□□□□□ -1.46
USP46-201ENST00000441222 COL11A1P12107 1806 aaPredicted RBP5.9□□□□□ -1.47
USP46-201ENST00000441222 MMP9P14780 707 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 HOXA6P31267 233 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 FAM3BP58499 235 aaPredicted RBP5.9□□□□□ -1.47
USP46-201ENST00000441222 SELENOTP62341 195 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 TWIST1Q15672 202 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 ANKRD37Q7Z713 158 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 TMEM179BQ7Z7N9 219 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 OR10J6PQ8NGY7 276 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 OR4X1Q8NH49 305 aa5.9□□□□□ -1.47
USP46-201ENST00000441222 PRDM7Q9NQW5 492 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms