RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MRPS24Q96EL2 167 aaKnown RBP19.13■□□□□ 0.65
VARS-217ENST00000440048 BANF2Q9H503 90 aa19.13■□□□□ 0.65
VARS-217ENST00000440048 KBTBD11-OT1A0A1B0GTJ5 212 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 A0A1B0GUS0 222 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 SRMP19623 302 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 TRAM1Q15629 374 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 SSX2Q16385 188 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 PLA1AQ53H76 456 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 MINOS1Q5TGZ0 78 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 BRICD5Q6PL45 260 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 TMEM104Q8NE00 496 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 Q9H521 79 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 MINOS1-NBL1R4GNA1 71 aa19.12■□□□□ 0.65
VARS-217ENST00000440048 FAM172BPA6NC97 362 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 VGLL3A8MV65 326 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 DENRO43583 198 aaKnown RBP19.11■□□□□ 0.65
VARS-217ENST00000440048 MGMTP16455 207 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 CD34P28906 385 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 FAM189A2Q15884 450 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 GLT8D1Q68CQ7 371 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 SLC35E4Q6ICL7 350 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 Q6ZSV7 163 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 RTN4RL2Q86UN3 420 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 OR4P4Q8NGL7 312 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 NDNFQ8TB73 568 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 SELENOIQ9C0D9 397 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 ZNF286AQ9HBT8 521 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 ACOT13Q9NPJ3 140 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 CALYQ9NYX4 217 aa19.11■□□□□ 0.65
VARS-217ENST00000440048 RRP15Q9Y3B9 282 aaKnown RBP19.11■□□□□ 0.65
VARS-217ENST00000440048 TRAV39A0A0B4J263 110 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 CLPSL1A2RUU4 121 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 CRTAPO75718 401 aaPredicted RBP19.1■□□□□ 0.65
VARS-217ENST00000440048 PSMA1P25786 263 aaKnown RBP19.1■□□□□ 0.65
VARS-217ENST00000440048 GABARAPL2P60520 117 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 C1orf100Q5SVJ3 147 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 OLFML2AQ68BL7 652 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 SHISA2Q6UWI4 295 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 ZNF367Q7RTV3 350 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 MRGPRDQ8TDS7 321 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 SLITRK2Q9H156 845 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 LINC00574Q9H8X3 128 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 SPACA1Q9HBV2 294 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 RCC2Q9P258 522 aaKnown RBP19.1■□□□□ 0.65
VARS-217ENST00000440048 GHRLQ9UBU3 117 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 HILPDAQ9Y5L2 63 aa19.1■□□□□ 0.65
VARS-217ENST00000440048 A0A087X0M5 115 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 A0A1B0GX30 115 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 TMEM30CPA0ZSE6 113 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 CD37P11049 281 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 NFYBP25208 207 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 HTR1DP28221 377 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 RAB13P51153 203 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 UTF1Q5T230 341 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 LINC01006Q8NI28 216 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 ZNF596Q8TC21 504 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 NEK7Q8TDX7 302 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 KIRREL1Q96J84 757 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 Q96M66 194 aa19.09■□□□□ 0.65
VARS-217ENST00000440048 FAM90A10PA6NDY2 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A18PA6NE21 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A16PA6NEW6 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A20PA6NIJ5 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A7PA6NKC0 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A22PA8MWA6 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A12PA8MX19 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A5PA8MXJ8 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A23PA8MXZ1 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 NPIPB11E5RHQ5 1161 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 IL1AP01583 271 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 IGLV1-47P01700 117 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A15PP0C7V4 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A13PP0C7W8 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A14PP0C7W9 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM90A24PP0C7X0 464 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 UBBP0CG47 229 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 JUNBP17275 347 aaPredicted RBP19.08■□□□□ 0.64
VARS-217ENST00000440048 FABP5Q01469 135 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 EMX1Q04741 257 aaPredicted RBP19.08■□□□□ 0.64
VARS-217ENST00000440048 FAM46BQ96A09 425 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 ABCB10Q9NRK6 738 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 IDI2-AS1Q9NZ38 188 aa19.08■□□□□ 0.64
VARS-217ENST00000440048 MCRIP1C9JLW8 97 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 MRPS14O60783 128 aaKnown RBP19.07■□□□□ 0.64
VARS-217ENST00000440048 TSPAN9O75954 239 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 GABRA5P31644 462 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 SSTR5P35346 364 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 SSX1Q16384 188 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 RAB12Q6IQ22 244 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 ZNF497Q6ZNH5 498 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 RFESDQ8TAC1 157 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 WFDC12Q8WWY7 111 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 CST11Q9H112 138 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 C16orf95Q9H693 158 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 DPM3Q9P2X0 92 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 RNF114Q9Y508 228 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 PEX16Q9Y5Y5 336 aa19.07■□□□□ 0.64
VARS-217ENST00000440048 TOR1AO14656 332 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 ARL6IP5O75915 188 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 MPIG6BO95866 241 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms