RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MMP9P14780 707 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 IGFBP2P18065 325 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 PAX6P26367 422 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RBP2P50120 134 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RAB5CP51148 216 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SNU13P55769 128 aaKnown RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ATP5J2P56134 94 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RND3P61587 244 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 RSPO1Q2MKA7 263 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 GPR157Q5UAW9 335 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ALKAL2Q6UX46 152 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 LURAP1LQ8IV03 231 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 FAM71E2Q8N5Q1 922 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 CSNK2A3Q8NEV1 391 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 OR4S1Q8NGB4 309 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 OR10K1Q8NGX5 313 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 OR13G1Q8NGZ3 307 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 MARCH1Q8TCQ1 289 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ARHGAP5-AS1Q96IT6 56 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 FAM71F1Q96KD3 344 aaPredicted RBP4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SYT3Q9BQG1 590 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 C1QTNF5Q9BXJ0 243 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 FN3KRPQ9HA64 309 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF319Q9P2F9 582 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ANXA10Q9UJ72 324 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 SLC7A11Q9UPY5 501 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 PIGLQ9Y2B2 252 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 KCNIP3Q9Y2W7 256 aa4.06□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF816-ZNF321PA0A0X1KG74 233 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 hCG_38984A0A1B0GV85 526 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 LYNX1G3V0Z9 82 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 JTBO76095 146 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 CST4P01036 141 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 PMP2P02689 132 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 CTXN2P0C2S0 81 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 LYNX1P0DP58 116 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 CHATP28329 748 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 BLVRBP30043 206 aaPredicted RBP4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SERPINF1P36955 418 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SUPT4H1P63272 117 aaKnown RBP4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FAM3AP98173 230 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 IL13RA2Q14627 380 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SMCO1Q147U7 214 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 UBE2V2Q15819 145 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 MPV17LQ2QL34 196 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 OR10K2Q6IF99 312 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SLC38A6Q8IZM9 456 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 TMEM104Q8NE00 496 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 OR8G5Q8NG78 346 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FGFBP3Q8TAT2 258 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 IL22RA2Q969J5 263 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SGK3Q96BR1 496 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SMIM8Q96KF7 97 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 CXorf58Q96LI9 332 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 NICN1Q9BSH3 213 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 RNF126Q9BV68 326 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ARV1Q9H2C2 271 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 IFT22Q9H7X7 185 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 PLEK2Q9NYT0 353 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 JKAMPQ9P055 326 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 MBD2Q9UBB5 411 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 MALRD1Q5VYJ5 2156 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 C5orf51A6NDU8 294 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 OR5H1A6NKK0 313 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 F5H0A9 414 aaPredicted RBP4.05□□□□□ -1.76
EDEM3-203ENST00000439962 H3BSH0 61 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SPDEFO95238 335 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 HEXAP06865 529 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF250P15622 560 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 AKR1C4P17516 323 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 VAMP1P23763 118 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ARR3P36575 388 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FABP6P51161 128 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ERVS71-1P61550 626 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 NKX6-1P78426 367 aaPredicted RBP4.05□□□□□ -1.76
EDEM3-203ENST00000439962 TGFBR3Q03167 851 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF273Q14593 569 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 DMRTC1Q5HYR2 192 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 OR52W1Q6IF63 320 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FAM122CQ6P4D5 195 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 MDP1Q86V88 176 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SVBPQ8N300 66 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 GVQW1Q8N7I0 195 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ADAD2Q8NCV1 583 aaKnown RBP4.05□□□□□ -1.76
EDEM3-203ENST00000439962 AKR7LQ8NHP1 331 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 LYPD6BQ8NI32 183 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FAM222BQ8WU58 562 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FAM216AQ8WUB2 273 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 DCUN1D4Q92564 292 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 BORCS8Q96FH0 119 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 REEP6Q96HR9 211 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 Q96MF0 132 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 LINC00052Q96N35 136 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 FOXB1Q99853 325 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ZNF471Q9BX82 626 aaPredicted RBP4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SEC11CQ9BY50 192 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 OR2H1Q9GZK4 316 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 SLC5A7Q9GZV3 580 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 HIPK2Q9H2X6 1198 aa4.05□□□□□ -1.76
EDEM3-203ENST00000439962 ESRP2Q9H6T0 727 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms