RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 SRMP19623 302 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 OMGP23515 440 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 RSBN1Q5VWQ0 802 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-207ENST00000435455 DHRS7BQ6IAN0 325 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-207ENST00000435455 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 ABHD12Q8N2K0 398 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 TMEM203Q969S6 136 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 ZNF747Q9BV97 191 aa13.18□□□□□ -0.3
SMPD4-207ENST00000435455 VGLL3A8MV65 326 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 H3BUI4 141 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 CRTAPO75718 401 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-207ENST00000435455 ARL6IP5O75915 188 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 CGB3P0DN86 165 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 CGB7P0DN87 165 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 MGMTP16455 207 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-207ENST00000435455 CD34P28906 385 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 GABRA5P31644 462 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 RPS25P62851 125 aaKnown RBP13.17□□□□□ -0.3
SMPD4-207ENST00000435455 RELBQ01201 579 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 C1orf100Q5SVJ3 147 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 NDNFQ8TB73 568 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 ZNF596Q8TC21 504 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 NEK7Q8TDX7 302 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 SELENOIQ9C0D9 397 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 CST11Q9H112 138 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 ACOT13Q9NPJ3 140 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 CALYQ9NYX4 217 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 ZNF581Q9P0T4 197 aa13.17□□□□□ -0.3
SMPD4-207ENST00000435455 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 IL1AP01583 271 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 HTR1DP28221 377 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
SMPD4-207ENST00000435455 SSX2Q16385 188 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 C17orf58Q2M2W7 97 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 SHISA2Q6UWI4 295 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 TMEM91Q6ZNR0 172 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMPD4-207ENST00000435455 Q96M66 194 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 BANF2Q9H503 90 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 LINC00574Q9H8X3 128 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 RAB18Q9NP72 206 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 ABCB10Q9NRK6 738 aa13.16□□□□□ -0.3
SMPD4-207ENST00000435455 RCC2Q9P258 522 aaKnown RBP13.16□□□□□ -0.3
SMPD4-207ENST00000435455 MCRIP1C9JLW8 97 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 GLAP06280 429 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 CD37P11049 281 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 GZMHP20718 246 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 PAX6P26367 422 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 GDNFP39905 211 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 DYNLT3P51808 116 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 PRRX1P54821 245 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 FAM189A2Q15884 450 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 LDLRAD2Q5SZI1 272 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 OLFML2AQ68BL7 652 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 DYNAPQ8N1N2 210 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 OR10A7Q8NGE5 316 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 OR4P4Q8NGL7 312 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 MRGPRDQ8TDS7 321 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 KIRREL1Q96J84 757 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 IDI2-AS1Q9NZ38 188 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 DPM3Q9P2X0 92 aa13.15□□□□□ -0.3
SMPD4-207ENST00000435455 A0A087X0M5 115 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 A0A1B0GX30 115 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 CLPSL1A2RUU4 121 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 TOR1AO14656 332 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 IGLV1-47P01700 117 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 FUT3P21217 361 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 NFYBP25208 207 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 HTR2CP28335 458 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 CEACAM3P40198 252 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 RANBP1P43487 201 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 FABP5Q01469 135 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 EMX1Q04741 257 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-207ENST00000435455 LY6EQ16553 131 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 PLA1AQ53H76 456 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 BAIAP2L2Q6UXY1 529 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 OR6M1Q8NGM8 313 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 C16orf95Q9H693 158 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 ZNF286AQ9HBT8 521 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 PITPNC1Q9UKF7 332 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 LRRC42Q9Y546 428 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 HILPDAQ9Y5L2 63 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 PEX16Q9Y5Y5 336 aa13.14□□□□□ -0.31
SMPD4-207ENST00000435455 NPIPB11E5RHQ5 1161 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms