RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 LAMP5Q9UJQ1 280 aa4.47□□□□□ -1.69
HDAC9-213ENST00000433709 KPTNQ9Y664 436 aa4.47□□□□□ -1.69
HDAC9-213ENST00000433709 U3KQV3 271 aa4.47□□□□□ -1.69
HDAC9-213ENST00000433709 JMJD1CQ15652 2540 aa4.47□□□□□ -1.69
HDAC9-213ENST00000433709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.46□□□□□ -1.69
HDAC9-213ENST00000433709 NIPBLQ6KC79 2804 aaeCLIP4.46□□□□□ -1.69
HDAC9-213ENST00000433709 A0A0U1RQV5 110 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 TVP23AA6NH52 213 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 OR5B21A6NL26 309 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 SNTNA6NMZ2 147 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 MPTX1A8MV57 137 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 TRAPPC2LH3BP13 241 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 CST4P01036 141 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 LHBP01229 141 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 HLA-DPB1P04440 258 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 PYCR1P32322 319 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 CD80P33681 288 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 ESRRGP62508 458 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 FAM3AP98173 230 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 CYCSP99999 105 aaKnown RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 TMED1Q13445 227 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 GINS1Q14691 196 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 RSPO1Q2MKA7 263 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 GLYATL3Q5SZD4 288 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 NCR3LG1Q68D85 454 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 METAP1DQ6UB28 335 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 GDPGP1Q6ZNW5 385 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 KRT77Q7Z794 578 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 SPATA24Q86W54 205 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 EGFL6Q8IUX8 553 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 ERI1Q8IV48 349 aaKnown RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 FAM89BQ8N5H3 189 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 KIR3DL3Q8N743 410 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 OR56B2PQ8NGI1 322 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 OR9Q1Q8NGQ5 310 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 ZNF420Q8TAQ5 688 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 FAM81AQ8TBF8 368 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 THEM6Q8WUY1 208 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 MRPL48Q96GC5 212 aaKnown RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 RBM4BQ9BQ04 359 aaKnown RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 PAPOLGQ9BWT3 736 aaKnown RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 OR51V1Q9H2C8 321 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 RIMS4Q9H426 269 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-213ENST00000433709 MOB1AQ9H8S9 216 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 NEK6Q9HC98 313 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 MMP26Q9NRE1 261 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 UFSP2Q9NUQ7 469 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 C1orf123Q9NWV4 160 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 TAS2R1Q9NYW7 299 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 POLDIP2Q9Y2S7 368 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 MMP24Q9Y5R2 645 aa4.46□□□□□ -1.7
HDAC9-213ENST00000433709 TLN2Q9Y4G6 2542 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 TRAV40A0A0B4J280 105 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 ZNF816-ZNF321PA0A0X1KG74 233 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 DHRS7CA6NNS2 312 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SRRM5B3KS81 715 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 H0YL77 283 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 PRAF2O60831 178 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SOX14O95416 240 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SERPINA3P01011 423 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 FBP1P09467 338 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 FASP25445 335 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 RIDAP52758 137 aaKnown RBP4.45□□□□□ -1.7
HDAC9-213ENST00000433709 CRISP1P54107 249 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 ZNF121P58317 390 aaPredicted RBP4.45□□□□□ -1.7
HDAC9-213ENST00000433709 GNG3P63215 75 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 CBX1P83916 185 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 CDK5Q00535 292 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 MS4A2Q01362 244 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 PAX2Q02962 417 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 RIPPLY1Q0D2K3 151 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SNAI3Q3KNW1 292 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 KLHL12Q53G59 568 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 LBHQ53QV2 105 aaPredicted RBP4.45□□□□□ -1.7
HDAC9-213ENST00000433709 TMEM255AQ5JRV8 349 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 PLBD1Q6P4A8 553 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 C11orf88Q6PI97 169 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 C17orf107Q6ZR85 190 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 NAA40Q86UY6 237 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 ZNF573Q86YE8 665 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 GID4Q8IVV7 300 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 ZNF679Q8IYX0 411 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SIGLECL1Q8N7X8 197 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 ZDHHC22Q8N966 263 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 OR1M1Q8NGA1 313 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 OR5A2Q8NGI9 324 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 OR51L1Q8NGJ5 315 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 OR5D13Q8NGL4 314 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 LRRC29Q8WV35 223 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 CANT1Q8WVQ1 401 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 TMIGD2Q96BF3 282 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SGK3Q96BR1 496 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 CCDC124Q96CT7 223 aaKnown RBP4.45□□□□□ -1.7
HDAC9-213ENST00000433709 C10orf35Q96D05 121 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 RNF170Q96K19 258 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 PLA2G12AQ9BZM1 189 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 TLNRD1Q9H1K6 362 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 MED20Q9H944 212 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 SLC25A19Q9HC21 320 aa4.45□□□□□ -1.7
HDAC9-213ENST00000433709 RAB18Q9NP72 206 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms