RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	GPX5	O75715	221 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR2F2	O95006	317 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	CDRT1	O95170	752 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	HTR3B	O95264	441 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	IL1A	P01583	271 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	MYL12A	P19105	171 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	BDKRB2	P30411	391 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	ZNF93	P35789	620 aa	Predicted RBP	14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	ARHGDIB	P52566	201 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	RPS11	P62280	158 aa	Known RBP eCLIP	14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	PPP3R1	P63098	170 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	DDI2	Q5TDH0	399 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	GGH	Q92820	318 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	GHSR	Q92847	366 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	ORAI1	Q96D31	301 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	AKR1E2	Q96JD6	320 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	OR5M11	Q96RB7	305 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	CITED2	Q99967	270 aa	Predicted RBP	14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	SLC25A33	Q9BSK2	321 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	METTL9	Q9H1A3	318 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	IDI2-AS1	Q9NZ38	188 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	ST3GAL6	Q9Y274	331 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	HSPE1-MOB4	S4R3N1	261 aa		14.15	□□□□□ -0.14
MRPL28-203	ENST00000429738	FAM90A18P	A6NE21	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A16P	A6NEW6	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A20P	A6NIJ5	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A9P	A6NNJ1	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A12P	A8MX19	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A5P	A8MXJ8	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738		J3QR06	171 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	PEX14	O75381	377 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	AMY1A	P04745	511 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	AMY2A	P04746	511 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A15P	P0C7V4	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A13P	P0C7W8	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A14P	P0C7W9	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM90A24P	P0C7X0	464 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	NFYB	P25208	207 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	C21orf33	P30042	268 aa	Predicted RBP	14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	RBM11	P57052	281 aa	Known RBP	14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	RIPK1	Q13546	671 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738		Q499Y3	187 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	YIF1B	Q5BJH7	314 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	LAIR2	Q6ISS4	152 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	CCDC144NL	Q6NUI1	221 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	LINC00596	Q86U02	117 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	OSR2	Q8N2R0	312 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	DHRSX	Q8N5I4	330 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	SUMF2	Q8NBJ7	301 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	OR10A7	Q8NGE5	316 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	MRGPRD	Q8TDS7	321 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	PHF21A	Q96BD5	680 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	DPCD	Q9BVM2	203 aa	Predicted RBP	14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	TENM3	Q9P273	2699 aa		14.14	□□□□□ -0.15
MRPL28-203	ENST00000429738	MAGEA13P	A6NCF6	341 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	FST	P19883	344 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	CD83	Q01151	205 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	ST3GAL4	Q11206	333 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	MED21	Q13503	144 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	ARSJ	Q5FYB0	599 aa	Predicted RBP	14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	OR4F17	Q8NGA8	305 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	FBLIM1	Q8WUP2	373 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	R3HDM4	Q96D70	268 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	OR4F4	Q96R69	305 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	ING4	Q9UNL4	249 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	PSG11	Q9UQ72	335 aa		14.13	□□□□□ -0.15
MRPL28-203	ENST00000429738	TRAV8-7	A0A075B6U6	113 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	TRBV5-7	A0A0A0MS05	114 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	GEMIN2	O14893	280 aa	Known RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	ZNF780A	O75290	641 aa	Predicted RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	OR7C1	O76099	320 aa	Predicted RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	SSTR5	P35346	364 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	MNDA	P41218	407 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	RBM39	Q14498	530 aa	Known RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	RCN1	Q15293	331 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	MPV17L	Q2QL34	196 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	ABCA11P	Q4W5N1	156 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	FOXB2	Q5VYV0	432 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	SLC16A12	Q6ZSM3	486 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	THNSL2	Q86YJ6	484 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	ZFP41	Q8N8Y5	198 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	ZNF184	Q99676	751 aa	Predicted RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	PCDHB16	Q9NRJ7	776 aa		14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	CHCHD3	Q9NX63	227 aa	Known RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	CNOT2	Q9NZN8	540 aa	Known RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	14.12	□□□□□ -0.15
MRPL28-203	ENST00000429738		A0A1W2PP11	408 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738		A0A1W2PPI3	338 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	CASQ2	O14958	399 aa	Predicted RBP	14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	CSTB	P04080	98 aa	Known RBP	14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	GNAO1	P09471	354 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	SERPINA2	P20848	420 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	COL7A1	Q02388	2944 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	OGFRL1	Q5TC84	451 aa	Predicted RBP	14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	OR5AU1	Q8NGC0	362 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	RFESD	Q8TAC1	157 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	LEAP2	Q969E1	77 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	RPE	Q96AT9	228 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	S100A13	Q99584	98 aa		14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms