RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 OR6C3Q9NZP0 311 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 P2RY10O00398 339 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 FAM157BP0CG42 384 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 GZMMP51124 257 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 SNRPNP63162 240 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 TGFBR3Q03167 851 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 FAAP20Q6NZ36 180 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 OLIG3Q7RTU3 272 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 CADM4Q8NFZ8 388 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 RSRP1Q9BUV0 290 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 LOC107986453A0A1B0GWG9 222 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 J3KRW8 73 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 CLDN15P56746 228 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 TIAL1Q01085 375 aaKnown RBP eCLIP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 PYY3Q5JQD4 70 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 PSG11Q9UQ72 335 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 CYSLTR1Q9Y271 337 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 C4orf47A7E2U8 309 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 MPPED1O15442 326 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 P2RY2P41231 377 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 HIST1H1AQ02539 215 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 LDLRAD2Q5SZI1 272 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 MFSD12Q6NUT3 480 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 STRADBQ9C0K7 418 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 SLC52A3Q9NQ40 469 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 LPAR6P43657 344 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 VEGFBP49765 207 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 UBE2G1P62253 170 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 ZNF784Q8NCA9 323 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 ZNF296Q8WUU4 475 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 JKAMPQ9P055 326 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 ZNF732B4DXR9 585 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 RUNX3Q13761 415 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 KIAA0040Q15053 153 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 SLC25A35Q3KQZ1 300 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 OR5C1Q8NGR4 320 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 MRAP2Q96G30 205 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 LAT2Q9GZY6 243 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 MRPS2Q9Y399 296 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 NKX6-3A6NJ46 265 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 C11orf94C9JXX5 98 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 BCAT2O15382 392 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 SLC25A17O43808 307 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 TCTN1Q2MV58 587 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 Q8IYB0 196 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 FAM169BQ8N8A8 192 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 ZFP62Q8NB50 900 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 SLC2A4RGQ9NR83 387 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 FLRT3Q9NZU0 649 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 A0A1B0GWA3 101 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 NPIPB13A6NJU9 1138 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 NPIPB4C9JG80 1138 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 TNFSF12O43508 249 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 CA3P07451 260 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 CKS1BP61024 79 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 BLNKQ8WV28 456 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
SYNPO2-202ENST00000429713 OR2W5A6NFC9 320 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 CYB561P49447 251 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 ABHD17CQ6PCB6 329 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 ZNF595Q8IYB9 648 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 TMEM99Q8N816 258 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 FBLL1A6NHQ2 334 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 FOXL1Q12952 345 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 LTC4SQ16873 150 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 BHLHA9Q7RTU4 235 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 HOGA1Q86XE5 327 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 ZBTB34Q8NCN2 500 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 KCNS1Q96KK3 526 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 HBZP02008 142 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 HIST1H1EP10412 219 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 SNU13P55769 128 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 INSL4Q14641 139 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 ZNF542PQ5EBM4 170 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 TEX29Q8N6K0 151 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 SIRT6Q8N6T7 355 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 CPEB3Q8NE35 698 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 TRMT61AQ96FX7 289 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 PECRQ9BY49 303 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 ULBP2Q9BZM5 246 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 HSF4Q9ULV5 492 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 A0A1W2PR48 441 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 DPRXA6NFQ7 191 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 AQP7P3A6NL99 342 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 ORM1P02763 201 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 HIST1H1DP16402 221 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 GALNSP34059 522 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 HES1Q14469 280 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 OR52B4Q8NGK2 314 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 PLA2G12AQ9BZM1 189 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 CDCP1Q9H5V8 836 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 SERINC4A6NH21 518 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 C9orf172C9J069 976 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 NTHL1P78549 312 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 TRAT1Q6PIZ9 186 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 PLXDC1Q8IUK5 500 aa6.66□□□□□ -1.34
SYNPO2-202ENST00000429713 OR2A1Q8NGT9 310 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms