RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 NTF3P20783 257 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 AMTP48728 403 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 SGCBQ16585 318 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 POC1AQ8NBT0 407 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 AQP3Q92482 292 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 TSSK2Q96PF2 358 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 PARLQ9H300 379 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 ABI3Q9P2A4 366 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 PILRAQ9UKJ1 303 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 B9D1Q9UPM9 204 aa12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 TDRD6O60522 2096 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-203ENST00000428982 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 A0A1B0GU03 582 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 PRSS37A4D1T9 235 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 MYF5P13349 255 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 TXNIPQ9H3M7 391 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM242Q9NWH2 141 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 R4GMQ9 66 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 PTPRSQ13332 1948 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 DUXBA0A1W2PPF3 345 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 DDIT4LQ96D03 193 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLAMF6Q96DU3 332 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMED7-TICAM2A0A0A6YYA0 188 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 A0A1B0GX78 115 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 LRP5LA4QPB2 252 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 H0YIG0 161 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 DUSP1P28562 367 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 HTD2P86397 168 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM225Q6GV28 225 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR4N2Q8NGD1 307 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 CTHRC1Q96CG8 243 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 GPR35Q9HC97 309 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 OSGIN2Q9Y236 505 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
SYNGAP1-203ENST00000428982 APOA2P02652 100 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 PSMB3P49720 205 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 RAB31Q13636 194 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ANKRD55Q3KP44 614 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 WDR38Q5JTN6 314 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ATG4DQ86TL0 474 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR2Y1Q8NGV0 311 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 MANBALQ9NQG1 85 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 CD33P20138 364 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZAR1Q86SH2 424 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 SPIN2AQ99865 258 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 SPIN2BQ9BPZ2 258 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ST3GAL6Q9Y274 331 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 TICRRQ7Z2Z1 1910 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 FXYD4P59646 89 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM267Q0VDI3 215 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 SHISA6Q6ZSJ9 500 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 TMEM156Q8N614 296 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ST6GALNAC3Q8NDV1 305 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR52N5Q8NH56 324 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF850A8MQ14 1090 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 GDF9O60383 454 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 HAND1O96004 215 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ZNF735P0CB33 412 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 MC5RP33032 325 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 NOXO1Q8NFA2 376 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR10AC1Q8NH08 325 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 ANAPC16Q96DE5 110 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 KTI12Q96EK9 354 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 OBSL1O75147 1896 aa12.61□□□□□ -0.39
SYNGAP1-203ENST00000428982 A0A1W2PR77 199 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 CLRN1P58418 232 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 CCL20P78556 96 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 C1orf140Q5VVS0 124 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR4C3Q8NH37 302 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 KCNG3Q8TAE7 436 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 PTX4Q96A99 478 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 A0A1B0GW64 132 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 ACKR1Q16570 336 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 STUMQ69YW2 141 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 GUSBP11Q6P575 273 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 SGCZQ96LD1 299 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 EMC9Q9Y3B6 208 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 ATXN7O15265 892 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 GOSR1O95249 250 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 OR10J4P0C629 311 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 SELENOVP59797 346 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 PLP1P60201 277 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 PPP1CAP62136 330 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 LINC00114Q6XXX2 140 aa12.6□□□□□ -0.39
SYNGAP1-203ENST00000428982 PRSS41Q7RTY9 318 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms