RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 M0QZK8 103 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 GGCTO75223 188 aaKnown RBP13.91□□□□□ -0.18
PKP4-205ENST00000426248 WNT5AP41221 380 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 CLDN15P56746 228 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 AAED1Q7RTV5 226 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 MYOZ1Q9NP98 299 aaPredicted RBP13.91□□□□□ -0.18
PKP4-205ENST00000426248 NCOR2Q9Y618 2525 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.91□□□□□ -0.18
PKP4-205ENST00000426248 CMTM1Q8IZ96 169 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 SLC26A10Q8NG04 563 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 SH3BGRL2Q9UJC5 107 aa13.91□□□□□ -0.18
PKP4-205ENST00000426248 ARPC3O15145 178 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 GCGP01275 180 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 PLPPR5Q32ZL2 321 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 MRPL24Q96A35 216 aaKnown RBP13.9□□□□□ -0.18
PKP4-205ENST00000426248 TXN2Q99757 166 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 ABHD14AQ9BUJ0 271 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 CHD3Q12873 2000 aaKnown RBP13.9□□□□□ -0.18
PKP4-205ENST00000426248 IRF2P14316 349 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 HLA-GP17693 338 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 TNFSF10P50591 281 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
PKP4-205ENST00000426248 PLAURQ03405 335 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 PHLDA2Q53GA4 152 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 TEX38Q6PEX7 206 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 FAM173AQ9BQD7 235 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 NICN1Q9BSH3 213 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 CNTD2Q9H8S5 307 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 E5RGE8 158 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 PLPP3O14495 311 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 COL10A1Q03692 680 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 PLEKHA2Q9HB19 425 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 NSG2Q9Y328 171 aa13.9□□□□□ -0.18
PKP4-205ENST00000426248 ZNF850A8MQ14 1090 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 CEBPZOSA8MTT3 80 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 CEACAM1P13688 526 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 GLIPR1P48060 266 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 ZNF441Q8N8Z8 693 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 NMNAT2Q9BZQ4 307 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 LOC102723996A0A087X1L8 192 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 SEC11BP0C7V7 166 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 TBPP20226 339 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 UCP3P55916 312 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 SRSF4Q08170 494 aaKnown RBP13.89□□□□□ -0.19
PKP4-205ENST00000426248 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
PKP4-205ENST00000426248 P2RY6Q15077 328 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 ZNF774Q6NX45 483 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 OR51T1Q8NGJ9 327 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 UCN2Q96RP3 112 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 CHCHD2Q9Y6H1 151 aaPredicted RBP13.89□□□□□ -0.19
PKP4-205ENST00000426248 MRPL33O75394 65 aaKnown RBP13.89□□□□□ -0.19
PKP4-205ENST00000426248 CD1AP06126 327 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 MAGEA5P43359 124 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 MFGE8Q08431 387 aaPredicted RBP13.89□□□□□ -0.19
PKP4-205ENST00000426248 CLN3Q13286 438 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 TMEM268Q5VZI3 342 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 SLC16A14Q7RTX9 510 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 RTN4RL2Q86UN3 420 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 OR13D1Q8NGV5 346 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 MSL2Q9HCI7 577 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 PLEK2Q9NYT0 353 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 PLA2G2EQ9NZK7 142 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 OR52A1Q9UKL2 312 aa13.89□□□□□ -0.19
PKP4-205ENST00000426248 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 H7BYZ3 331 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 DLL1O00548 723 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 CST7O76096 145 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 MPZL1O95297 269 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 CYC1P08574 325 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 MELTFP08582 738 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 SELEP16581 610 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 CDAP32320 146 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 MEOX1P50221 254 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 SLC17A1Q14916 467 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 C3AR1Q16581 482 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 ZNF766Q5HY98 468 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 CNEP1R1Q8N9A8 125 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 MAGT1Q9H0U3 335 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 FOXD3Q9UJU5 478 aaPredicted RBP13.88□□□□□ -0.19
PKP4-205ENST00000426248 HSPB6O14558 160 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 LMX1BO60663 402 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 BGLAPP02818 100 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 CTLA4P16410 223 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 DEGS2Q6QHC5 323 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 ASCL5Q7RTU5 278 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 DCXRQ7Z4W1 244 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 OIT3Q8WWZ8 545 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 TRBV5-7A0A0A0MS05 114 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 A0A1W2PNV4 684 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 CD33P20138 364 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 GGTLC2Q14390 218 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 GLIPR1L1Q6UWM5 242 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 POC1AQ8NBT0 407 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 OR4C5Q8NGB2 326 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 RPUSD4Q96CM3 377 aaKnown RBP13.88□□□□□ -0.19
PKP4-205ENST00000426248 PIEZO2Q9H5I5 2752 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 A0A0G2JMM0 328 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 A0A1W2PPB8 328 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms