RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SULT4A1Q9BR01 284 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 PARD6AQ9NPB6 346 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 PPIHO43447 177 aaKnown RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 NME2P1O60361 137 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 CRYGSP22914 178 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 MRPL49Q13405 166 aaKnown RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 Q6ZPA2 131 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 FAM185AQ8N0U4 392 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 FBXL14Q8N1E6 418 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 TMEM105Q8N8V8 129 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 KIRREL1Q96J84 757 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 IP6K3Q96PC2 410 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 TM2D1Q9BX74 207 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 SH3BGRL3Q9H299 93 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 IFNA10P01566 189 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 MBPP02686 304 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-205ENST00000425443 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
COL12A1-205ENST00000425443 OR5AC1P0C628 307 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 SLC22A25Q6T423 547 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 OR2H1Q9GZK4 316 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 GPR35Q9HC97 309 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 C1orf123Q9NWV4 160 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 B4GALT7Q9UBV7 327 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 MEMO1Q9Y316 297 aa11.21□□□□□ -0.61
COL12A1-205ENST00000425443 DSPP15924 2871 aaKnown RBP11.21□□□□□ -0.62
COL12A1-205ENST00000425443 PINLYPA6NC86 204 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 FAM166BA8MTA8 275 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 VSTM5A8MXK1 200 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 OR7C1O76099 320 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-205ENST00000425443 CST4P01036 141 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 IFNA21P01568 189 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 WNT5AP41221 380 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 LINC00696Q6ZRV3 163 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 SKA3Q8IX90 412 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 NUDT10Q8NFP7 164 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 FGFBP3Q8TAT2 258 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 Q96M66 194 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 PRRX2Q99811 253 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 ABI3Q9P2A4 366 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 ANXA10Q9UJ72 324 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 MRPS18CQ9Y3D5 142 aaKnown RBP11.21□□□□□ -0.62
COL12A1-205ENST00000425443 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 DOCK10Q96BY6 2186 aa11.21□□□□□ -0.62
COL12A1-205ENST00000425443 A0A096LPE4 126 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 hCG_1809904A0A1W2PP81 198 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 A0A1W2PPZ6 126 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 A0A1W2PR64 198 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 A0A1W2PRV1 198 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 PET100P0DJ07 73 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-205ENST00000425443 LHFPL2Q6ZUX7 228 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 RCC1LQ96I51 464 aaKnown RBP11.2□□□□□ -0.62
COL12A1-205ENST00000425443 CALHM2Q9HA72 323 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 TUBD1Q9UJT1 453 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 AP4M1O00189 453 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 PLGLB1Q02325 96 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF92Q03936 586 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 ADAM5Q6NVV9 412 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 HSD17B11Q8NBQ5 300 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-205ENST00000425443 R3HDM4Q96D70 268 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF442Q9H7R0 627 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 PARP11Q9NR21 331 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 R4GN57 208 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 TECTAO75443 2155 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 ITGB1BP1O14713 200 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 TGOLN2O43493 480 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 LINC00614P0C842 121 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 MIDNQ504T8 468 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 OR10A7Q8NGE5 316 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 OR52M1Q8NGK5 317 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 LYPD6BQ8NI32 183 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 ST3GAL6Q9Y274 331 aa11.2□□□□□ -0.62
COL12A1-205ENST00000425443 SVILO95425 2214 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 M0R036 132 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 SYNGR4O95473 234 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 PRH1P02810 166 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 ARG1P05089 322 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF728P0DKX0 622 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 OMGP23515 440 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 DUSP1P28562 367 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 RAB5CP51148 216 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 OSR2Q8N2R0 312 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 HIST1H2BAQ96A08 127 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 PLA2G3Q9NZ20 509 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 KIAA1549Q9HCM3 1950 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 NCKAP5O14513 1909 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 A6NLC8 198 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 SPIN3Q5JUX0 258 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 RIPPLY2Q5TAB7 128 aa11.19□□□□□ -0.62
COL12A1-205ENST00000425443 ABLIM2Q6H8Q1 611 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms