RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 COQ8AQ8NI60 647 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 THAP6Q8TBB0 222 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 PLPPR2Q96GM1 343 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 SEC22AQ96IW7 307 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 EHFQ9NZC4 300 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 ATP23Q9Y6H3 246 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 FLNCQ14315 2725 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 CACNA1DQ01668 2161 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 IGHV3-64DA0A0J9YX35 117 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 I3L521 148 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 BCL2L11O43521 198 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 CLDN14O95500 239 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 IGHV3-13P01766 116 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 DTYMKP23919 212 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 HAGHLQ6PII5 290 aaPredicted RBP12.73□□□□□ -0.37
CALD1-206ENST00000424922 ALKAL2Q6UX46 152 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 BATF2Q8N1L9 274 aa12.73□□□□□ -0.37
CALD1-206ENST00000424922 PCNPQ8WW12 178 aaKnown RBP12.73□□□□□ -0.37
CALD1-206ENST00000424922 RBPMSQ93062 196 aaKnown RBP12.73□□□□□ -0.37
CALD1-206ENST00000424922 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 KANTRA0A1W2PQU2 76 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 RNF222A6NCQ9 220 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 SFTPBP07988 381 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 GABRR1P24046 479 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 CLEC18BQ6UXF7 455 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 WDR86Q86TI4 376 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 ZNF573Q86YE8 665 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
CALD1-206ENST00000424922 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 REG4Q9BYZ8 158 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 MRPL37Q9BZE1 423 aaKnown RBP12.72□□□□□ -0.37
CALD1-206ENST00000424922 OR51I2Q9H344 312 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 DECR2Q9NUI1 292 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 RDH8Q9NYR8 311 aa12.72□□□□□ -0.37
CALD1-206ENST00000424922 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.71□□□□□ -0.37
CALD1-206ENST00000424922 SYNGR1O43759 233 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 PSMB6P28072 239 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 CHATP28329 748 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 SERPINF1P36955 418 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 PMELP40967 661 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 NPBWR2P48146 333 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.37
CALD1-206ENST00000424922 ST8SIA2Q92186 375 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 GTF3AQ92664 365 aaKnown RBP12.71□□□□□ -0.37
CALD1-206ENST00000424922 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
CALD1-206ENST00000424922 SLC25A32Q9H2D1 315 aa12.71□□□□□ -0.37
CALD1-206ENST00000424922 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.71□□□□□ -0.38
CALD1-206ENST00000424922 C5orf51A6NDU8 294 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 MFSD2BA6NFX1 497 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 C1QL1O75973 258 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 RPS2P15880 293 aaKnown RBP12.71□□□□□ -0.38
CALD1-206ENST00000424922 AGAP20933 346 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 SELENOVP59797 346 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 MKXQ8IYA7 352 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.38
CALD1-206ENST00000424922 MRPL24Q96A35 216 aaKnown RBP12.71□□□□□ -0.38
CALD1-206ENST00000424922 PHYHIPLQ96FC7 376 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 CHMP1AQ9HD42 196 aaPredicted RBP12.71□□□□□ -0.38
CALD1-206ENST00000424922 MTCH1Q9NZJ7 389 aa12.71□□□□□ -0.38
CALD1-206ENST00000424922 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
CALD1-206ENST00000424922 TRAV20A0A0B4J274 112 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 LRP5LA4QPB2 252 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 SDCBPO00560 298 aaPredicted RBP12.7□□□□□ -0.38
CALD1-206ENST00000424922 CLN5O75503 358 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 GRPP07492 148 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 BCL3P20749 454 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 ZNF273Q14593 569 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 PDZD9Q8IXQ8 264 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
CALD1-206ENST00000424922 SAXO1Q8IYX7 474 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 OSR2Q8N2R0 312 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 SCCPDHQ8NBX0 429 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 OR2Z1Q8NG97 314 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 ZNF701Q9NV72 531 aaPredicted RBP12.7□□□□□ -0.38
CALD1-206ENST00000424922 SDHAF2Q9NX18 166 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 ANXA10Q9UJ72 324 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 C14orf166Q9Y224 244 aaKnown RBP12.7□□□□□ -0.38
CALD1-206ENST00000424922 A0A1B0GW55 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 F8VVB4 439 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 F8VWA3 439 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 RHBDL1O75783 438 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 CD3EP07766 207 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 LYL1P12980 280 aa12.7□□□□□ -0.38
CALD1-206ENST00000424922 ZNF154Q13106 437 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms