RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 CYCSP99999 105 aaKnown RBP6.15□□□□□ -1.43
LSM8-204ENST00000424702 LRRC37A5PQ49AS3 106 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 PLAC9Q5JTB6 97 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 RNF144BQ7Z419 303 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 OR10J5Q8NHC4 309 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 FYTTD1Q96QD9 318 aaKnown RBP6.15□□□□□ -1.43
LSM8-204ENST00000424702 WRBO00258 174 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 MGST3O14880 152 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 FABP7O15540 132 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 FPR2P25090 351 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 CHATP28329 748 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.43
LSM8-204ENST00000424702 MRPL41Q8IXM3 137 aaKnown RBP6.15□□□□□ -1.43
LSM8-204ENST00000424702 FAM89BQ8N5H3 189 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 POC1AQ8NBT0 407 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 SULT4A1Q9BR01 284 aa6.15□□□□□ -1.43
LSM8-204ENST00000424702 DPCDQ9BVM2 203 aaPredicted RBP6.15□□□□□ -1.43
LSM8-204ENST00000424702 ZNF436Q9C0F3 470 aaPredicted RBP6.15□□□□□ -1.43
LSM8-204ENST00000424702 MED12LQ86YW9 2145 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 IGKV1-27A0A075B6S5 117 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 TRBV23-1A0A0A0MS06 115 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 A0A1B0GW55 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4L2P0CJ85 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4L3P0CJ86 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4L4P0CJ87 422 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4L5P0CJ88 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4L6P0CJ89 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4L7P0CJ90 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 CCKARP32238 428 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 QRFPP83859 136 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 KRTAP27-1Q3LI81 207 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 PCSK4Q6UW60 755 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 INO80EQ8NBZ0 244 aaPredicted RBP6.14□□□□□ -1.43
LSM8-204ENST00000424702 HPSE2Q8WWQ2 592 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 SNX22Q96L94 193 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 BBC3Q96PG8 261 aaPredicted RBP6.14□□□□□ -1.43
LSM8-204ENST00000424702 HDHD3Q9BSH5 251 aaPredicted RBP6.14□□□□□ -1.43
LSM8-204ENST00000424702 TRAF4Q9BUZ4 470 aaPredicted RBP6.14□□□□□ -1.43
LSM8-204ENST00000424702 DUX4Q9UBX2 424 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 C3orf80F5H4A9 247 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 IGHV1-46P01743 117 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 PI3P19957 117 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 CEACAM3P40198 252 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 BAMBIQ13145 260 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 CATR1Q13166 79 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 VAX1Q5SQQ9 334 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 SUMF2Q8NBJ7 301 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 OR52B4Q8NGK2 314 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 WDR13Q9H1Z4 485 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 LAMA1P25391 3075 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 IGLV3-9A0A075B6K5 115 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 C7orf66A4D0T2 115 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 CD74P04233 296 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 CD55P08174 381 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 ADH4P08319 380 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 FCGR3AP08637 254 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 PET100P0DJ07 73 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 EPHA1P21709 976 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 CDKN1AP38936 164 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 S100A10P60903 97 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 ZNF154Q13106 437 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 ATXN7L3Q14CW9 347 aaPredicted RBP6.14□□□□□ -1.43
LSM8-204ENST00000424702 TMEM128Q5BJH2 165 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 C17orf107Q6ZR85 190 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 Q6ZSR3 168 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 LYG2Q86SG7 212 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 GCSAMQ8N6F7 178 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 OR2AK2Q8NG84 335 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 DYRK2Q92630 601 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 MTCH1Q9NZJ7 389 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 FAM96BQ9Y3D0 163 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 PCNX1Q96RV3 2341 aa6.14□□□□□ -1.43
LSM8-204ENST00000424702 A0A0A6YYD4 124 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ZSCAN5BA6NJL1 495 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 RBMXL2O75526 392 aaKnown RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 SCGB1D2O95969 90 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 PRDX2P32119 198 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ERVFRD-1P60508 538 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 UBE2MP61081 183 aaKnown RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 PHLDA2Q53GA4 152 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ATPAF1Q5TC12 328 aaPredicted RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 ZNF826PQ6ZT77 177 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 FOXRED2Q8IWF2 684 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 OR8H1Q8NGG4 311 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ZNF486Q96H40 463 aaPredicted RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 OR51I2Q9H344 312 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 NPDC1Q9NQX5 325 aaPredicted RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 SLC25A10Q9UBX3 287 aaPredicted RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 IGKV1-12A0A0C4DH73 117 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 TMPRSS2O15393 492 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 IFNA2P01563 188 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 IGKV1D-12P01611 117 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 C1QBP02746 253 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 HOXB5P09067 269 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 GIPP09681 153 aaPredicted RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 AP2S1P53680 142 aaPredicted RBP6.13□□□□□ -1.43
LSM8-204ENST00000424702 ZNF626Q68DY1 528 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ELP2Q6IA86 826 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ZNF695Q8IW36 515 aa6.13□□□□□ -1.43
LSM8-204ENST00000424702 ZNF561Q8N587 486 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms