RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 RTN4RL2Q86UN3 420 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 NDNFQ8TB73 568 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 ZNF596Q8TC21 504 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 MALSU1Q96EH3 234 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 MGLLQ99685 303 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 MEGF9Q9H1U4 602 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 PPIL3Q9H2H8 161 aaKnown RBP8.89□□□□□ -0.99
USP49-204ENST00000423567 RAB18Q9NP72 206 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 C1RLQ9NZP8 487 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 GHRLQ9UBU3 117 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 KIF25Q9UIL4 384 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 KBTBD11-OT1A0A1B0GTJ5 212 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 TMEM30CPA0ZSE6 113 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 MCRIP1C9JLW8 97 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 DENRO43583 198 aaKnown RBP8.88□□□□□ -0.99
USP49-204ENST00000423567 MRPS14O60783 128 aaKnown RBP8.88□□□□□ -0.99
USP49-204ENST00000423567 UCHL1P09936 223 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 UBBP0CG47 229 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 MGMTP16455 207 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 CPEP16870 476 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 MDKP21741 143 aaPredicted RBP8.88□□□□□ -0.99
USP49-204ENST00000423567 ARHGDIBP52566 201 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 PAX5Q02548 391 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 INSL4Q14641 139 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 FAM189A2Q15884 450 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 SSX2Q16385 188 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 MINOS1Q5TGZ0 78 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 SHISA2Q6UWI4 295 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 LHFPL4Q7Z7J7 247 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 ABHD12Q8N2K0 398 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 SVOPQ8N4V2 548 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 CREB3L1Q96BA8 519 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 SELENOIQ9C0D9 397 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 RRP15Q9Y3B9 282 aaKnown RBP8.88□□□□□ -0.99
USP49-204ENST00000423567 MMP24Q9Y5R2 645 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 MINOS1-NBL1R4GNA1 71 aa8.88□□□□□ -0.99
USP49-204ENST00000423567 A0A1W2PP11 408 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A10PA6NDY2 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A20PA6NIJ5 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A7PA6NKC0 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A12PA8MX19 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A23PA8MXZ1 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 SC5DO75845 299 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 MMP23AO75900 390 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 IL1AP01583 271 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 NFYBP25208 207 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 HTR1DP28221 377 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 HTR2CP28335 458 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 RANBP1P43487 201 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 PRRX1P54821 245 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 RPS25P62851 125 aaKnown RBP8.87□□□□□ -0.99
USP49-204ENST00000423567 LY6EQ16553 131 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 PLA1AQ53H76 456 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM27D1Q5T7N8 215 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 RSBN1Q5VWQ0 802 aaPredicted RBP8.87□□□□□ -0.99
USP49-204ENST00000423567 OLFML2AQ68BL7 652 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 SLC35E4Q6ICL7 350 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 DTX3Q8N9I9 347 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 OR13A1Q8NGR1 328 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 PLPPR1Q8TBJ4 325 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 MRGPRDQ8TDS7 321 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 TAF15Q92804 592 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP49-204ENST00000423567 AJUBAQ96IF1 538 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 YTHDF1Q9BYJ9 559 aaKnown RBP8.87□□□□□ -0.99
USP49-204ENST00000423567 BANF2Q9H503 90 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 RAB9BQ9NP90 201 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 ACOT13Q9NPJ3 140 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 CALYQ9NYX4 217 aa8.87□□□□□ -0.99
USP49-204ENST00000423567 FAM172BPA6NC97 362 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 VGLL3A8MV65 326 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 LEUTXA8MZ59 168 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 AIPO00170 330 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 F2RL2O00254 374 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 MPIG6BO95866 241 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 GZMHP20718 246 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 GABRA5P31644 462 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 CEACAM3P40198 252 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 C17orf58Q2M2W7 97 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 C1orf100Q5SVJ3 147 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 RAB12Q6IQ22 244 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 LRRTM1Q86UE6 522 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 LYPD6Q86Y78 171 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 TMEM104Q8NE00 496 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 OR10A7Q8NGE5 316 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 OR6M1Q8NGM8 313 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 KCNG3Q8TAE7 436 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 FAM46BQ96A09 425 aa8.86□□□□□ -0.99
USP49-204ENST00000423567 PLGRKTQ9HBL7 147 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms