RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MADCAM1Q13477 382 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 OR13A1Q8NGR1 328 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 OR5AK2Q8NH90 309 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 RDH12Q96NR8 316 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 IDI2-AS1Q9NZ38 188 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 A0A1W2PPI3 338 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 WI2-2373I1.2A0A1W2PRP0 233 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 SERPINE3A8MV23 424 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 ETV1P50549 477 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 RAB7AP51149 207 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 GBX2P52951 348 aaPredicted RBP12.81□□□□□ -0.36
COL18A1-205ENST00000423214 KRTAP10-11P60412 298 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
COL18A1-205ENST00000423214 UTF1Q5T230 341 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 ZNF329Q86UD4 541 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 THNSL2Q86YJ6 484 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 OR8H3Q8N146 312 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 DRAM1Q8N682 238 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 MRGPRDQ8TDS7 321 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 TNFAIP8L1Q8WVP5 186 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 BARHL1Q9BZE3 327 aa12.81□□□□□ -0.36
COL18A1-205ENST00000423214 FGF20Q9NP95 211 aaPredicted RBP12.81□□□□□ -0.36
COL18A1-205ENST00000423214 FGF16O43320 207 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 RAB3AP20336 220 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 SLC35B1P78383 322 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 CD69Q07108 199 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 MRPL28Q13084 256 aaKnown RBP12.8□□□□□ -0.36
COL18A1-205ENST00000423214 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
COL18A1-205ENST00000423214 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 RSU1Q15404 277 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 OR2G6Q5TZ20 316 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 XAF1Q6GPH4 301 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 C11orf87Q6NUJ2 197 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 ETV3LQ6ZN32 361 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 SATL1Q86VE3 508 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 MRPL41Q8IXM3 137 aaKnown RBP12.8□□□□□ -0.36
COL18A1-205ENST00000423214 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 PARP16Q8N5Y8 322 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 C5orf56Q8N8D9 126 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 KLHL30-AS1Q8NEE0 82 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 PXT1Q8NFP0 134 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 HAVCR2Q8TDQ0 301 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 NOL4LQ96MY1 436 aaPredicted RBP12.8□□□□□ -0.36
COL18A1-205ENST00000423214 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
COL18A1-205ENST00000423214 PSG11Q9UQ72 335 aa12.8□□□□□ -0.36
COL18A1-205ENST00000423214 TRAV24A0A0B4J272 114 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A18PA6NE21 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A16PA6NEW6 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A20PA6NIJ5 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A9PA6NNJ1 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A12PA8MX19 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A5PA8MXJ8 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 GABRPO00591 440 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 IGKV1D-33P01593 117 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 IGKV1-33P01594 117 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A15PP0C7V4 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A13PP0C7W8 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A14PP0C7W9 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FAM90A24PP0C7X0 464 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 SLC6A1P30531 599 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 SSTR5P35346 364 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 SOX2P48431 317 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 KCNJ3P48549 501 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 THBS3P49746 956 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 ADARB1P78563 741 aaKnown RBP12.79□□□□□ -0.36
COL18A1-205ENST00000423214 EGFEM1PQ0D2K5 195 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 PIGYQ3MUY2 71 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 RSBN1Q5VWQ0 802 aaPredicted RBP12.79□□□□□ -0.36
COL18A1-205ENST00000423214 TTC23Q5W5X9 447 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 ELP2Q6IA86 826 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 OR2W3Q7Z3T1 314 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 SLC35E3Q7Z769 313 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 FOXRED2Q8IWF2 684 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 OR10K1Q8NGX5 313 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 NCOR1P1Q9H4R4 102 aa12.79□□□□□ -0.36
COL18A1-205ENST00000423214 HSD17B6O14756 317 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 HNF4GQ14541 408 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 PACRGLQ8N7B6 248 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 RFESDQ8TAC1 157 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 PLPPR1Q8TBJ4 325 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 CLEC2DQ9UHP7 191 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
COL18A1-205ENST00000423214 HTR3BO95264 441 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 CD2P06729 351 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 CGB3P0DN86 165 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 CGB7P0DN87 165 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 DCKP27707 260 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 PAX5Q02548 391 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 DIAPH2-AS1Q14236 149 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 UNQ9370/PRO34162Q6UXP9 181 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 COMMD1Q8N668 190 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 OR51A2Q8NGJ7 313 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 RGP1Q92546 391 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-205ENST00000423214 S100A13Q99584 98 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 DPCDQ9BVM2 203 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-205ENST00000423214 JAM3Q9BX67 310 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms