RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SNAI3Q3KNW1 292 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 ANKDD1AQ495B1 522 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 GLYATL3Q5SZD4 288 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 AGBL2Q5U5Z8 902 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 DNM1P34Q6PK57 102 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 ACP7Q6ZNF0 438 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 LINC00336Q6ZUF6 198 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 CCDC80Q76M96 950 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 WDR86Q86TI4 376 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 OAFQ86UD1 273 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 GTSCR1Q86UQ5 136 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 SERPINA12Q8IW75 414 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 MICU2Q8IYU8 434 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 OR6V1Q8N148 313 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 STPG2Q8N412 459 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 ZNF676Q8N7Q3 588 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 OR1N2Q8NGR9 330 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 RASSF5Q8WWW0 418 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 RPL3LQ92901 407 aaKnown RBP3.72□□□□□ -1.81
SFXN1-202ENST00000421887 CREB3L1Q96BA8 519 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 BPIFA2Q96DR5 249 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 BTBD10Q9BSF8 475 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 CLEC7AQ9BXN2 247 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 SYT4Q9H2B2 425 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 YY1AP1Q9H869 796 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 DNAJC4Q9NNZ3 241 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 AIG1Q9NVV5 245 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
SFXN1-202ENST00000421887 IGKV1D-17A0A075B6S4 117 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TRAV27A0A087WT01 109 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 IGHV2-26A0A0B4J1V2 119 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TRBV2A0A0J9YWF9 115 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 C5orf51A6NDU8 294 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 LEUTXA8MZ59 168 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 C12orf77C9JDV5 145 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 M0QX08 132 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 OR5F1O95221 314 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 CD14P08571 375 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TSPAN19P0C672 248 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 OR8U9P0C7N5 309 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF728P0DKX0 622 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 SMIM18P0DKX4 95 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TROVE2P10155 538 aaKnown RBP eCLIP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 PSG2P11465 335 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 IDO1P14902 403 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 POLR2JP52435 117 aaKnown RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 EDDM3BP56851 147 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ISL1P61371 349 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 HIST1H3AP68431 136 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 CKAP4Q07065 602 aaKnown RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 MFGE8Q08431 387 aaPredicted RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF616Q08AN1 781 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 KRR1Q13601 381 aaKnown RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 HES1Q14469 280 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 RSPO1Q2MKA7 263 aaPredicted RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 SMIM21Q3B7S5 101 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 SLC36A3Q495N2 470 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 MESTQ5EB52 335 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 LDLRAD2Q5SZI1 272 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 HIST2H3PS2Q5TEC6 136 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 LGALS9CQ6DKI2 356 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 DRAM2Q6UX65 266 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 HIST2H3AQ71DI3 136 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 Q75L30 129 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 GDPD3Q7L5L3 318 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 RBM45Q8IUH3 476 aaKnown RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 EGFL6Q8IUX8 553 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 NKAIN4Q8IVV8 208 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 AQP12AQ8IXF9 295 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 PGAM4Q8N0Y7 254 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 BATF2Q8N1L9 274 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 GBGT1Q8N5D6 347 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 FAM71E2Q8N5Q1 922 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF781Q8N8C0 355 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF671Q8TAW3 534 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TRMT10AQ8TBZ6 339 aaKnown RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF596Q8TC21 504 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 CCDC107Q8WV48 283 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 SDSLQ96GA7 329 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 Q96M85 177 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF714Q96N38 554 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 PRSS27Q9BQR3 290 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ATG101Q9BSB4 218 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TLNRD1Q9H1K6 362 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 TMEM38AQ9H6F2 299 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 NMNAT1Q9HAN9 279 aaPredicted RBP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 RETNQ9HD89 108 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 Q9N2K0 584 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 ABCB9Q9NP78 766 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 FAM118AQ9NWS6 357 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 DPM3Q9P2X0 92 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.71□□□□□ -1.82
SFXN1-202ENST00000421887 PYCARDQ9ULZ3 195 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 GPR132Q9UNW8 380 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 SH3GLB1Q9Y371 365 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 LHFPL6Q9Y693 200 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 RYR1P21817 5038 aa3.71□□□□□ -1.82
SFXN1-202ENST00000421887 HUWE1Q7Z6Z7 4374 aaKnown RBP3.7□□□□□ -1.82
SFXN1-202ENST00000421887 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
SFXN1-202ENST00000421887 RFPL4AA6NLU0 287 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms