RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 OR52N1Q8NH53 320 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 GLMPQ8WWB7 406 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 GGHQ92820 318 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 SMIM19Q96E16 107 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 DAZAP1Q96EP5 407 aaKnown RBP5.64□□□□□ -1.51
HMGN1-205ENST00000419378 TMEM80Q96HE8 168 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 SPACA5Q96QH8 159 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 CLEC2DQ9UHP7 191 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 PSORS1C1Q9UIG5 152 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 SIRT4Q9Y6E7 314 aaPredicted RBP5.64□□□□□ -1.51
HMGN1-205ENST00000419378 A0A1W2PPH5 198 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 OGG1O15527 345 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 KDM4BO94953 1096 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 IGHV4-59P01825 116 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 HCKP08631 526 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 FBP1P09467 338 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 CCL3L1P16619 93 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 PRKACAP17612 351 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 EEF1B2P24534 225 aaKnown RBP5.63□□□□□ -1.51
HMGN1-205ENST00000419378 DUSP1P28562 367 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 SAA4P35542 130 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 UBE2E1P51965 193 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 AQP4P55087 323 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 SNU13P55769 128 aaKnown RBP5.63□□□□□ -1.51
HMGN1-205ENST00000419378 ZP1P60852 638 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 ST3GAL4Q11206 333 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 FHL2Q14192 279 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 EDDM3AQ14507 147 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF146Q15072 292 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 KISS1Q15726 138 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 SPIN3Q5JUX0 258 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 HCP5Q6MZN7 132 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 C17orf107Q6ZR85 190 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 AHSA2Q719I0 299 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 TCF23Q7RTU1 214 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 SAXO1Q8IYX7 474 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 OR8H2Q8N162 312 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 FAM58AQ8N1B3 248 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 PNKDQ8N490 385 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF485Q8NCK3 441 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 OR5D13Q8NGL4 314 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 OR13C5Q8NGS8 318 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 GPR148Q8TDV2 347 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 SSMEM1Q8WWF3 244 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 TAF15Q92804 592 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGN1-205ENST00000419378 CHIAQ9BZP6 476 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 KLK15Q9H2R5 256 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 SEBOXQ9HB31 216 aaPredicted RBP5.63□□□□□ -1.51
HMGN1-205ENST00000419378 NEK6Q9HC98 313 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 HMG20AQ9NP66 347 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 TNFRSF19Q9NS68 423 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 CHCHD3Q9NX63 227 aaKnown RBP5.63□□□□□ -1.51
HMGN1-205ENST00000419378 BABAM2Q9NXR7 383 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 TAS2R4Q9NYW5 299 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 CNOT2Q9NZN8 540 aaKnown RBP5.63□□□□□ -1.51
HMGN1-205ENST00000419378 POMT1Q9Y6A1 747 aa5.63□□□□□ -1.51
HMGN1-205ENST00000419378 TRBV5-5A0A0J9YX44 114 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 MEX3AA1L020 520 aaKnown RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 MEIOCA2RUB1 952 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 SIRPB1O00241 398 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 GABRPO00591 440 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 MYL12BO14950 172 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 OR2H2O95918 312 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 PAHP00439 452 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 CD2P06729 351 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 RAB3AP20336 220 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 GABRR1P24046 479 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 COX7A1P24310 79 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 C21orf33P30042 268 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 IER3P46695 156 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 OR3A1P47881 315 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 DLX6P56179 175 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 EDDM3BP56851 147 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 ACSM1Q08AH1 577 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 GRK1Q15835 563 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 DMKNQ6E0U4 476 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 C16orf87Q6PH81 154 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 TMEM65Q6PI78 240 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF782Q6ZMW2 699 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 GDPD3Q7L5L3 318 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 STX19Q8N4C7 294 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 C11orf42Q8N5U0 333 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 TPRX1Q8N7U7 411 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 C3orf56Q8N813 242 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 ZFP41Q8N8Y5 198 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 ZSCAN4Q8NAM6 433 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 BPIFB6Q8NFQ5 453 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 OR4S1Q8NGB4 309 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 OR52N4Q8NGI2 321 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 OR51A2Q8NGJ7 313 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 GHSRQ92847 366 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 TMEM106AQ96A25 262 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 CPNE2Q96FN4 548 aaPredicted RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 PGLYRP3Q96LB9 341 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 FAM192AQ9GZU8 254 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 CHST6Q9GZX3 395 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 RHOFQ9HBH0 211 aa5.62□□□□□ -1.51
HMGN1-205ENST00000419378 EXOSC4Q9NPD3 245 aaKnown RBP5.62□□□□□ -1.51
HMGN1-205ENST00000419378 PLCXD1Q9NUJ7 323 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms