RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 TCEAL3Q969E4 200 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ISOC2Q96AB3 205 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 C12orf49Q9H741 205 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SLC22A20A6NK97 555 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 NGFP01138 241 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ZNF16P17020 682 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ACP1P24666 158 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 RPL23AP62750 156 aaKnown RBP10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 FAM180AQ6UWF9 173 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 COLCA1Q6ZS62 124 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SELENOHQ8IZQ5 122 aaKnown RBP10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 TMEM56Q96MV1 263 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SIGLEC12Q96PQ1 595 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 HES7Q9BYE0 225 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 MTCH1Q9NZJ7 389 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 TMEM56-RWDD3S4R434 201 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 DUXBA0A1W2PPF3 345 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 PITX3O75364 302 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 COX5BP10606 129 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 DAOP14920 347 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SPINK2P20155 84 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 LHX2P50458 406 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ZNF561Q8N587 486 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 HPSE2Q8WWQ2 592 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ZNF552Q9H707 407 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 LHX6Q9UPM6 363 aa10.04□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 COLCA2A8K830 154 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 CDRT15L2A8MXV6 281 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SYNGR1O43759 233 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ADAM5Q6NVV9 412 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 FAM58AQ8N1B3 248 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 TTTY12Q9BZ98 90 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 KCNS2Q9ULS6 477 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 DEGS1O15121 323 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 CHST1O43916 411 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 NEURL1O76050 574 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 PPP1CCP36873 323 aaKnown RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 RND3P61587 244 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 TLE4Q04727 773 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 RNPS1Q15287 305 aaKnown RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 EIF2S3LQ2VIR3 472 aaKnown RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 CDCP2Q5VXM1 449 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 P4HA3Q7Z4N8 544 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ABHD14BQ96IU4 210 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ERRFI1Q9UJM3 462 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 MPC1Q9Y5U8 109 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 IGSF23A1L1A6 192 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 OR5B21A6NL26 309 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 CNOT4O95628 575 aaKnown RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 NAPSAO96009 420 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 DYNLT3P51808 116 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 BAXQ07812 192 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 MRPL49Q13405 166 aaKnown RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 RHEBQ15382 184 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 PEAR1Q5VY43 1037 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 SCGB1C1Q8TD33 95 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 IP6K3Q96PC2 410 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 ZDHHC8Q9ULC8 765 aa10.03□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 DNAJC13O75165 2243 aa10.02□□□□□ -0.8
CSPG4P3Y-201ENST00000418188 DFFBO76075 338 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FOXG1P55316 489 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 CLDN18P56856 261 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR2T2Q6IF00 324 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 C5orf24Q7Z6I8 188 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FAM24BQ8N5W8 94 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 IGKV1D-13A0A0B4J2D9 117 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 H3BP45 60 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 KLRC4-KLRK1H3BQV0 150 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 IGKV1-13P0DP09 117 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 CA6P23280 308 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 UCP1P25874 307 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 C3AR1Q16581 482 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SRSF7Q16629 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HAGHQ16775 308 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 DCAF10Q5QP82 559 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 Q6ZS49 121 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 LINC00596Q86U02 117 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TMEM251Q8N6I4 163 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HIST1H2BAQ96A08 127 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 GPR87Q9BY21 358 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 A0A1W2PPH5 198 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RBFOX3A6NFN3 312 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 A6NLC8 198 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 H0Y980 276 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 F2RP25116 425 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SULT1A1P50225 295 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SPATA46Q5T0L3 261 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 USB1Q9BQ65 265 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms