RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
PAF1-202ENST00000416728 ETV3LQ6ZN32 361 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 SATL1Q86VE3 508 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
PAF1-202ENST00000416728 OR8H3Q8N146 312 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 MRGPRDQ8TDS7 321 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 NOL4LQ96MY1 436 aaPredicted RBP11.43□□□□□ -0.58
PAF1-202ENST00000416728 PDCD1LG2Q9BQ51 273 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 LINC00574Q9H8X3 128 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 ERVK13-1Q9NX77 482 aa11.43□□□□□ -0.58
PAF1-202ENST00000416728 SERPINE3A8MV23 424 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 NUDT19A8MXV4 375 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 NPIPB11E5RHQ5 1161 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 E9PI62 339 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 GABRPO00591 440 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 FGF16O43320 207 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 SSTR5P35346 364 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 THBS3P49746 956 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 GBX2P52951 348 aaPredicted RBP11.42□□□□□ -0.58
PAF1-202ENST00000416728 PAX5Q02548 391 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 HNF4GQ14541 408 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 PIGYQ3MUY2 71 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 C11orf87Q6NUJ2 197 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 OR2W3Q7Z3T1 314 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 CBR4Q8N4T8 237 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 OR51A2Q8NGJ7 313 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 OR10K1Q8NGX5 313 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 Q96MT0 163 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 AMBNQ9NP70 447 aa11.42□□□□□ -0.58
PAF1-202ENST00000416728 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.42□□□□□ -0.58
PAF1-202ENST00000416728 MPZL2O60487 215 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 IGKV1D-33P01593 117 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 IGKV1-33P01594 117 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 GABRB1P18505 474 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 SLC6A1P30531 599 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 SOX2P48431 317 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 SLC35B1P78383 322 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 RAB40BQ12829 278 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 SLC16A12Q6ZSM3 486 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 FOXRED2Q8IWF2 684 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 MCRIP2Q9BUT9 160 aaKnown RBP11.41□□□□□ -0.58
PAF1-202ENST00000416728 DPCDQ9BVM2 203 aaPredicted RBP11.41□□□□□ -0.58
PAF1-202ENST00000416728 ZFP57Q9NU63 452 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 FAM118AQ9NWS6 357 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 TRAV39A0A0B4J263 110 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 H3BNX3 289 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 HSD17B6O14756 317 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 HTR3BO95264 441 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 CD2P06729 351 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 CD69Q07108 199 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 ZNF529Q6P280 563 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 ZFP1Q6P2D0 407 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 KLHL30-AS1Q8NEE0 82 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 Q8NFD4 153 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 RHOXF1Q8NHV9 184 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 JAM3Q9BX67 310 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 TAS2R4Q9NYW5 299 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 ST3GAL6Q9Y274 331 aa11.41□□□□□ -0.58
PAF1-202ENST00000416728 A0A1W2PPE3 182 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.59
PAF1-202ENST00000416728 CDRT1O95170 752 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 IGHG2P01859 326 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 GZMHP20718 246 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 MYCNOSP40205 109 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.59
PAF1-202ENST00000416728 ZNF816Q0VGE8 651 aaPredicted RBP11.4□□□□□ -0.59
PAF1-202ENST00000416728 DCTN2Q13561 401 aaKnown RBP11.4□□□□□ -0.59
PAF1-202ENST00000416728 ASCL4Q6XD76 172 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 C18orf65Q6ZTR6 163 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 MOB3BQ86TA1 216 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 SUMF2Q8NBJ7 301 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 OR52I1Q8NGK6 324 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 GPR148Q8TDV2 347 aa11.4□□□□□ -0.59
PAF1-202ENST00000416728 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.59
PAF1-202ENST00000416728 RPL36Q9Y3U8 105 aaKnown RBP11.4□□□□□ -0.59
PAF1-202ENST00000416728 TMEM30CPA0ZSE6 113 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 CCRL2O00421 344 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 CSTBP04080 98 aaKnown RBP11.39□□□□□ -0.59
PAF1-202ENST00000416728 GAPDHP04406 335 aaKnown RBP11.39□□□□□ -0.59
PAF1-202ENST00000416728 REG1BP48304 166 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 RBM11P57052 281 aaKnown RBP11.39□□□□□ -0.59
PAF1-202ENST00000416728 PPP3R1P63098 170 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 UNQ9370/PRO34162Q6UXP9 181 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 STPG2Q8N412 459 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 TMEM106AQ96A25 262 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 P2RX4Q99571 388 aa11.39□□□□□ -0.59
PAF1-202ENST00000416728 B9D2Q9BPU9 175 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms