RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZNF844Q08AG5 666 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 NECTIN1Q15223 517 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 NRF1Q16656 503 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 BEAN1Q3B7T3 259 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM52BQ4KMG9 183 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 FAM106AQ4KMX7 169 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 AWAT1Q58HT5 328 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ALG10BQ5I7T1 473 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ENTPD8Q5MY95 495 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GLYATL3Q5SZD4 288 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GLT8D1Q68CQ7 371 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 EPGNQ6UW88 154 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GLIPR1L1Q6UWM5 242 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 APOOLQ6UXV4 268 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 FOXI2Q6ZQN5 318 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GOLT1AQ6ZVE7 132 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PRSS48Q7RTY5 328 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 HSD11B1LQ7Z5J1 315 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 SERPINA11Q86U17 422 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GKN2Q86XP6 184 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM219Q86XT9 240 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 SFTPA2Q8IWL1 248 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 C20orf196Q8IYI0 205 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 BEST3Q8N1M1 668 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 YIPF7Q8N8F6 280 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 C5orf17Q8NAS9 161 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM178AQ8NBL3 297 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 BPIFB6Q8NFQ5 453 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR11H6Q8NGC7 330 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR1L1Q8NH94 360 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MBD3L1Q8WWY6 194 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PNPLA2Q96AD5 504 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MYEOVQ96EZ4 313 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PHYHIPLQ96FC7 376 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 DERL3Q96Q80 235 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 KIR2DL4Q99706 377 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 FAM173AQ9BQD7 235 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ANAPC13Q9BS18 74 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF471Q9BX82 626 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 KRTAP1-5Q9BYS1 174 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR8D2Q9GZM6 311 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GTSF1LQ9H1H1 148 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR2D2Q9H210 308 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 CXXC4Q9H2H0 198 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ISG20L2Q9H9L3 353 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ELL3Q9HB65 397 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 C3orf14Q9HBI5 128 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 SLC25A19Q9HC21 320 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 HES4Q9HCC6 221 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PRTFDC1Q9NRG1 225 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 CBLN4Q9NTU7 201 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 FBXL12Q9NXK8 326 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR5AC2Q9NZP5 309 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ANXA10Q9UJ72 324 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 HIGD1AQ9Y241 93 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 VDAC3Q9Y277 283 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 WDR62O43379 1518 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 EPRSP07814 1512 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MAGI3Q5TCQ9 1506 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 CLASP1Q7Z460 1538 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ROBO3Q96MS0 1386 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ZCCHC11Q5TAX3 1644 aaKnown RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CACNA1SQ13698 1873 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 DUXBA0A1W2PPF3 345 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 FAM90A26D6RGX4 464 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 H7C1C5 153 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 K7ENP7 123 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CCL24O00175 119 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 EDIL3O43854 480 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CXCL13O43927 109 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF682O95780 498 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 IGHG2P01859 326 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 OR4A8P0C604 315 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CT45A10P0DMU9 189 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 BCKDHAP12694 445 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 SPNP16150 400 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 GNB3P16520 340 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CHRNB2P17787 502 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 KLK2P20151 261 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 BCL3P20749 454 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 SFTPDP35247 375 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ARL2P36404 184 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 UBE2E1P51965 193 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 AKR1C2P52895 323 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ARPP19P56211 112 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 LCN6P62502 163 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 BTG2P78543 158 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RPL18AQ02543 176 aaKnown RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 LTBQ06643 244 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 PSG7Q13046 419 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF266Q14584 549 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CLINT1Q14677 625 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TRIP6Q15654 476 aaKnown RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 IQCJQ1A5X6 159 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CEACAM16Q2WEN9 425 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TIGITQ495A1 244 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RAB6CQ53S08 254 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 LY6G5CQ5SRR4 150 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms