RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 TOR1AO14656 332 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 RNLSQ5VYX0 342 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 Q6ZS46 218 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 LYPD6Q86Y78 171 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 C11orf44Q8N8P7 122 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 ZNF565Q8N9K5 539 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 OR2T6Q8NHC8 308 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 CYYR1Q96J86 154 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 NCOR1P1Q9H4R4 102 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 IFT22Q9H7X7 185 aa21.14■□□□□ 0.97
VEGFA-207ENST00000413642 A0A087X0M5 115 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 A0A1B0GX30 115 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 FAM90A22PA8MWA6 464 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 M0QZ24 198 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 TIMM23O14925 209 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 GTF2F2P13984 249 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 SSTR5P35346 364 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 GP2P55259 537 aaKnown RBP21.13■□□□□ 0.97
VEGFA-207ENST00000413642 RBM39Q14498 530 aaKnown RBP21.13■□□□□ 0.97
VEGFA-207ENST00000413642 HLA-DRB5Q30154 266 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 FAM27D1Q5T7N8 215 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 KLHDC1Q8N7A1 406 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 MYDGFQ969H8 173 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 MND1Q9BWT6 205 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 BANF2Q9H503 90 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 SCN3BQ9NY72 215 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 IDI2-AS1Q9NZ38 188 aa21.13■□□□□ 0.97
VEGFA-207ENST00000413642 LEUTXA8MZ59 168 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 LY6LH3BQJ8 138 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 BUB1B-PAK6H3BSN5 160 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 ZNF780AO75290 641 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-207ENST00000413642 IL1AP01583 271 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 KCNJ3P48549 501 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 BLCAPP62952 87 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 IRF3Q14653 427 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 ACSM3Q53FZ2 586 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 TMED9Q9BVK6 235 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 PITPNC1Q9UKF7 332 aa21.12■□□□□ 0.97
VEGFA-207ENST00000413642 NPIPB11E5RHQ5 1161 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 TSPAN15O95858 294 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 VSIG10L2P0DP72 767 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 MYF6P23409 242 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 VHLP40337 213 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 PRRX1P54821 245 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 SLC35A2P78381 396 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 PAX5Q02548 391 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 SPHARQ15513 63 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 MPV17LQ2QL34 196 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 TPTE2P1Q5T6R2 138 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 AWAT2Q6E213 333 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 UNQ9370/PRO34162Q6UXP9 181 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 TMEM104Q8NE00 496 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 UBALD1Q8TB05 177 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 CCDC107Q8WV48 283 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 LINC00574Q9H8X3 128 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 SERTAD4Q9NUC0 356 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 TRRAPQ9Y4A5 3859 aa21.11■□□□□ 0.97
VEGFA-207ENST00000413642 HERPUD1Q15011 391 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 MED22Q15528 200 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 LINC00596Q86U02 117 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 Q8N2B8 174 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 OR9G1Q8NH87 305 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 NEK7Q8TDX7 302 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 PCDHB16Q9NRJ7 776 aa21.1■□□□□ 0.97
VEGFA-207ENST00000413642 PKD1L1Q8TDX9 2849 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 TMEM30CPA0ZSE6 113 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 GNG10P50151 68 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 GPR176Q14439 515 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 KIAA2026Q5HYC2 2103 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 FAM53AQ6NSI3 398 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-207ENST00000413642 CDH26Q8IXH8 852 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 ANKRD60Q9BZ19 345 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 MMP28Q9H239 520 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 DUSP21Q9H596 190 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 PSG11Q9UQ72 335 aa21.09■□□□□ 0.97
VEGFA-207ENST00000413642 A0A1W2PPE3 182 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 J3QR06 171 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 MAPK3P27361 379 aaPredicted RBP21.08■□□□□ 0.97
VEGFA-207ENST00000413642 TMEM95Q3KNT9 176 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 IZUMO2Q6UXV1 221 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 Q6ZTK2 550 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 LRRTM1Q86UE6 522 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 SELENOIQ9C0D9 397 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 TPRKBQ9Y3C4 175 aa21.08■□□□□ 0.97
VEGFA-207ENST00000413642 H0YHG0 523 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 MT-ND4P03905 459 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 MGMTP16455 207 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 DIAPH2-AS1Q14236 149 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 C11orf88Q6PI97 169 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 MS4A15Q8N5U1 240 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 PRSS22Q9GZN4 317 aa21.07■□□□□ 0.96
VEGFA-207ENST00000413642 RCC2Q9P258 522 aaKnown RBP21.07■□□□□ 0.96
VEGFA-207ENST00000413642 C15orf65H3BRN8 121 aa21.06■□□□□ 0.96
VEGFA-207ENST00000413642 CRTAPO75718 401 aaPredicted RBP21.06■□□□□ 0.96
VEGFA-207ENST00000413642 BRS3P32247 399 aa21.06■□□□□ 0.96
VEGFA-207ENST00000413642 CEACAM3P40198 252 aa21.06■□□□□ 0.96
VEGFA-207ENST00000413642 LIPKQ5VXJ0 399 aa21.06■□□□□ 0.96
VEGFA-207ENST00000413642 RAB12Q6IQ22 244 aa21.06■□□□□ 0.96
VEGFA-207ENST00000413642 ZNF497Q6ZNH5 498 aa21.06■□□□□ 0.96
VEGFA-207ENST00000413642 CEACAM19Q7Z692 300 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms