RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ARL6IP5O75915 188 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 TTRP02766 147 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 CD24P25063 80 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 KIR3DL2P43630 455 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 FABP5Q01469 135 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 Q499Y3 187 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 ACSM3Q53FZ2 586 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 BCL2L15Q5TBC7 163 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 PLCXD3Q63HM9 321 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 C18orf65Q6ZTR6 163 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 C8orf86Q6ZUL3 223 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 OR2W3Q7Z3T1 314 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 PRSS35Q8N3Z0 413 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 ZFP41Q8N8Y5 198 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 OR4P4Q8NGL7 312 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 ZNF714Q96N38 554 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 PRR25Q96S07 402 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 ASCL2Q99929 193 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 SLC25A33Q9BSK2 321 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 OR51E2Q9H255 320 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 TXNL4BQ9NX01 149 aaKnown RBP7.58□□□□□ -1.2
RFFL-203ENST00000413582 OR14J1Q9UGF5 321 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 HHLA2Q9UM44 414 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 SLC22A13Q9Y226 551 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 SESN1Q9Y6P5 492 aa7.58□□□□□ -1.2
RFFL-203ENST00000413582 PNMA8CA0A1B0GUJ8 204 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 PSMB11A5LHX3 300 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 A6NJY4 79 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 H3BMQ9 156 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 H3BUI4 141 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 GABRPO00591 440 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 RAMP3O60896 148 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 TMEM127O75204 238 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 GPX5O75715 221 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 OR2F2O95006 317 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 NXPH2O95156 264 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 IL1AP01583 271 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 CD2P06729 351 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 UCHL1P09936 223 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 CCL1P22362 96 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 MYCNOSP40205 109 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 MAP2K3P46734 347 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 HAAOP46952 286 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 LUMP51884 338 aaPredicted RBP7.57□□□□□ -1.2
RFFL-203ENST00000413582 EDDM3BP56851 147 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 RPS11P62280 158 aaKnown RBP eCLIP7.57□□□□□ -1.2
RFFL-203ENST00000413582 RPS25P62851 125 aaKnown RBP7.57□□□□□ -1.2
RFFL-203ENST00000413582 TMEM91Q6ZNR0 172 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 MOB3CQ70IA8 216 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 TPRA1Q86W33 373 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 BATF2Q8N1L9 274 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 ASCC1Q8N9N2 400 aaKnown RBP7.57□□□□□ -1.2
RFFL-203ENST00000413582 OR51E1Q8TCB6 317 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 CAPSLQ8WWF8 208 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 KCTD7Q96MP8 289 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 RBM14Q96PK6 669 aaKnown RBP7.57□□□□□ -1.2
RFFL-203ENST00000413582 PDCD1LG2Q9BQ51 273 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 CHCHD6Q9BRQ6 235 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 TMED9Q9BVK6 235 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 CLEC7AQ9BXN2 247 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 NAA50Q9GZZ1 169 aaKnown RBP7.57□□□□□ -1.2
RFFL-203ENST00000413582 GPR84Q9NQS5 396 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 GTF2A1LQ9UNN4 478 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 STARD9Q9P2P6 4700 aa7.57□□□□□ -1.2
RFFL-203ENST00000413582 TRBV5-7A0A0A0MS05 114 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 TRAV1-2A0A0B4J238 106 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 A0A1B0GTI1 187 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 MPZP25189 248 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 HTR1DP28221 377 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 SLC6A1P30531 599 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 RANBP1P43487 201 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 MTNR1BP49286 362 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 PSMD7P51665 324 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 CEACAM19Q7Z692 300 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 ZNF329Q86UD4 541 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 OR8H2Q8N162 312 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 KLHL30-AS1Q8NEE0 82 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 Q8NFD4 153 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 TMEM203Q969S6 136 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 TMEM133Q9H2Q1 129 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
RFFL-203ENST00000413582 POLDIP2Q9Y2S7 368 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 CSMD3Q7Z407 3707 aa7.56□□□□□ -1.2
RFFL-203ENST00000413582 LOC100506127A0A0U1RQW1 187 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 LOC107986453A0A1B0GWG9 222 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 PQLC2LA1A4F0 135 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 NUDT19A8MXV4 375 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 SYT7O43581 403 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 MMP23AO75900 390 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 DHRS3O75911 302 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 OCM2P0CE71 109 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 FSTP19883 344 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 MYL9P24844 172 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 CHATP28329 748 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 BRS3P32247 399 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 OR3A4PP47883 348 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 VBP1P61758 197 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 MEF2CQ06413 473 aaPredicted RBP7.55□□□□□ -1.2
RFFL-203ENST00000413582 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms