RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 IDNKQ5T6J7 187 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 NCR3LG1Q68D85 454 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 CLVS1Q8IUQ0 354 aaPredicted RBP14.89□□□□□ -0.03
PAX3-208ENST00000409828 PLPPR1Q8TBJ4 325 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 TNFRSF14Q92956 283 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 PCGF1Q9BSM1 259 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 GAL3ST2Q9H3Q3 398 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 KIF25Q9UIL4 384 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 NUP50Q9UKX7 468 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 SPATA2Q9UM82 520 aa14.89□□□□□ -0.03
PAX3-208ENST00000409828 NF1P21359 2839 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 ZNF729A6NN14 1252 aaPredicted RBP14.88□□□□□ -0.03
PAX3-208ENST00000409828 RAB27BO00194 218 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 MT-ND4P03905 459 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 SRD5A1P18405 259 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 GZMHP20718 246 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 SRP14P37108 136 aaKnown RBP14.88□□□□□ -0.03
PAX3-208ENST00000409828 TMEM50BP56557 158 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 ERVFRD-1P60508 538 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 GUCA2AQ02747 115 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 KLF17Q5JT82 389 aaPredicted RBP14.88□□□□□ -0.03
PAX3-208ENST00000409828 C9orf139Q6ZV77 190 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 VMO1Q7Z5L0 202 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 ZNF554Q86TJ5 538 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 TPRX1Q8N7U7 411 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 NEK7Q8TDX7 302 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 DCSTAMPQ9H295 470 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 RIMS4Q9H426 269 aaPredicted RBP14.88□□□□□ -0.03
PAX3-208ENST00000409828 PLEKHJ1Q9NW61 149 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 ETAA1Q9NY74 926 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 C2CD3Q4AC94 2353 aa14.88□□□□□ -0.03
PAX3-208ENST00000409828 MEIKINA0A087WXM9 373 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 A0A0A6YYH2 397 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 A0A0B4J203 849 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 A6NJ64 397 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 SOCS1O15524 211 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 CCL3L1P16619 93 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 VEGFCP49767 419 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 RORCP51449 518 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 EFNB2P52799 333 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 TUSC1Q2TAM9 212 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 GPR157Q5UAW9 335 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 TRAT1Q6PIZ9 186 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 HEPN1Q6WQI6 88 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 Q6ZTK2 550 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 OR10A7Q8NGE5 316 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 LGALS14Q8TCE9 139 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 ACOT12Q8WYK0 555 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 CMTM3Q96MX0 182 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 HEXA-AS1Q9H8Q6 139 aa14.87□□□□□ -0.03
PAX3-208ENST00000409828 CENPVL3A0A0U1RRI6 287 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 KBTBD11-OT1A0A1B0GTJ5 212 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 ORC5O43913 435 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 SNRPBP14678 240 aaKnown RBP14.86□□□□□ -0.03
PAX3-208ENST00000409828 NKAPLQ5M9Q1 402 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 OR52W1Q6IF63 320 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 C6orf201Q7Z4U5 140 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 TRAPPC6BQ86SZ2 158 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 OR10R2Q8NGX6 335 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 RAB3CQ96E17 227 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 SULT4A1Q9BR01 284 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 RAB9BQ9NP90 201 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.86□□□□□ -0.03
PAX3-208ENST00000409828 MBNL3Q9NUK0 354 aaKnown RBP14.86□□□□□ -0.03
PAX3-208ENST00000409828 RHBDL2Q9NX52 303 aa14.86□□□□□ -0.03
PAX3-208ENST00000409828 TRBV6-6A0A0A6YYG2 114 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 TRAV40A0A0B4J280 105 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 NPIPB11E5RHQ5 1161 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 ZNF701M0R085 212 aaPredicted RBP14.85□□□□□ -0.03
PAX3-208ENST00000409828 NOL3O60936 208 aaKnown RBP14.85□□□□□ -0.03
PAX3-208ENST00000409828 CLPXO76031 633 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 NAPSAO96009 420 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 PAHP00439 452 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 IGHV1-8P0DP01 117 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 FPR2P25090 351 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 UBE2E1P51965 193 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 PLA2G7Q13093 441 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 BRICD5Q6PL45 260 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 OR13A1Q8NGR1 328 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 AP3S1Q92572 193 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 ARHGAP5-AS1Q96IT6 56 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 FAAP24Q9BTP7 215 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 SIRT7Q9NRC8 400 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 CEPT1Q9Y6K0 416 aa14.85□□□□□ -0.03
PAX3-208ENST00000409828 A0A087X0M5 115 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 IGHV1-69DA0A0B4J2H0 117 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 A0A1B0GX30 115 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 UBE2QL1A1L167 161 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 SERPINE3A8MV23 424 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 RNASEK-C17orf49H0YIS7 233 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 IGHV1-69P01742 117 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 IGHV4-38-2P0DP08 117 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 ZNF182P17025 639 aaPredicted RBP14.84□□□□□ -0.03
PAX3-208ENST00000409828 EPHA1P21709 976 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 C17orf58Q2M2W7 97 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 TMEM30BQ3MIR4 351 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 PLAC9Q5JTB6 97 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 C6orf183Q5T699 404 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 IL17RELQ6ZVW7 336 aa14.84□□□□□ -0.03
PAX3-208ENST00000409828 ISOC1Q96CN7 298 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms