RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 RPL34P49207 117 aaKnown RBP11.45□□□□□ -0.58
COL6A3-206ENST00000409809 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-206ENST00000409809 PRDX4Q13162 271 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 TMEM207Q6UWW9 146 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 DERL1Q9BUN8 251 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 ADAMTS5Q9UNA0 930 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-206ENST00000409809 DPRXA6NFQ7 191 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 PLA2G10O15496 165 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 RGRP47804 291 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 GUCA2AQ02747 115 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 RGPD3A6NKT7 1758 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-206ENST00000409809 RGPD4Q7Z3J3 1758 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 MFAP2P55001 183 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 KCNAB1Q14722 419 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 SPNS3Q6ZMD2 512 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 GBGT1Q8N5D6 347 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 NPEPL1Q8NDH3 523 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 ICAM5Q9UMF0 924 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 IGF2P01344 180 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL6A3-206ENST00000409809 RDH5Q92781 318 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 LSM10Q969L4 123 aaKnown RBP11.45□□□□□ -0.58
COL6A3-206ENST00000409809 MGST2Q99735 147 aa11.45□□□□□ -0.58
COL6A3-206ENST00000409809 KIR2DL1P43626 348 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 RAB9AP51151 201 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 BCAT2O15382 392 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 SELENOTP62341 195 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MRPS21P82921 87 aaKnown RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 ZNF785A8K8V0 405 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MRPL58Q14197 206 aaKnown RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 PQLC2Q6ZP29 291 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 AGBL5Q8NDL9 886 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 DOCK7Q96N67 2140 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 UBE2CO00762 179 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 SLC25A17O43808 307 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 AKR7A3O95154 331 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 DANCRP0C864 163 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 TNFRSF1AP19438 455 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 AGAP20933 346 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 PCBP3P57721 371 aaKnown RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 FER1L6-AS2Q96M78 137 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 NHSQ6T4R5 1651 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 OR4C45A6NMZ5 311 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 PSMB5P28074 263 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 SEC11AP67812 179 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 ZNF816Q0VGE8 651 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MSL2Q9HCI7 577 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MRPS18AQ9NVS2 196 aaKnown RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MBD1Q9UIS9 605 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-206ENST00000409809 KIAA1551Q9HCM1 1747 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 SHISA4Q96DD7 197 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 WDR13Q9H1Z4 485 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 MRGPREQ86SM8 312 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 AUP1Q9Y679 476 aa11.44□□□□□ -0.58
COL6A3-206ENST00000409809 GRPP07492 148 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 PPP2CBP62714 309 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 HYAL1Q12794 435 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 ZNF79Q15937 498 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 C20orf141Q9NUB4 165 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 SIRT5Q9NXA8 310 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 PTPRFP10586 1907 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 ZNF506Q5JVG8 444 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 DCAF12Q5T6F0 453 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 TMEM25Q86YD3 366 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 ZNF740Q8NDX6 193 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 LINC00615Q96LM1 132 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-206ENST00000409809 MMP25Q9NPA2 562 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 CD8AP01732 235 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 OR4A8P0C604 315 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 TBC1D26Q86UD7 250 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 PRELID3AQ96N28 172 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 SCRG1O75711 98 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 IL36GQ9NZH8 169 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 TRBV5-4A0A0C4DH59 114 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 A0A1W2PR48 441 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 CDC14CA4D256 554 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 EPPINO95925 133 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 COMPP49747 757 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-206ENST00000409809 WDR38Q5JTN6 314 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 NUDT10Q8NFP7 164 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 CHODLQ9H9P2 273 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 POLR2AP24928 1970 aaKnown RBP11.43□□□□□ -0.58
COL6A3-206ENST00000409809 C5orf49A4QMS7 147 aa11.43□□□□□ -0.58
COL6A3-206ENST00000409809 H1FXQ92522 213 aaKnown RBP11.43□□□□□ -0.58
COL6A3-206ENST00000409809 MRPL18Q9H0U6 180 aaKnown RBP11.43□□□□□ -0.58
COL6A3-206ENST00000409809 ZNF430Q9H8G1 570 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-206ENST00000409809 TAF1P21675 1872 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms