RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SIRPB1O00241 398 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 SNAPC5O75971 98 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 HAND1O96004 215 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 ZNF728P0DKX0 622 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 RPS2P15880 293 aaKnown RBP11.88□□□□□ -0.51
LIMS2-206ENST00000409754 LMO1P25800 156 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 GRNP28799 593 aaKnown RBP11.88□□□□□ -0.51
LIMS2-206ENST00000409754 ASCL1P50553 236 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 SUPT4H1P63272 117 aaKnown RBP11.88□□□□□ -0.51
LIMS2-206ENST00000409754 ACP7Q6ZNF0 438 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 MOB1BQ7L9L4 216 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 GAPTQ8N292 157 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 OR10Z1Q8NGY1 313 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 MRPL24Q96A35 216 aaKnown RBP11.88□□□□□ -0.51
LIMS2-206ENST00000409754 ELMOD3Q96FG2 381 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 WDR89Q96FK6 387 aaPredicted RBP11.88□□□□□ -0.51
LIMS2-206ENST00000409754 GON7Q9BXV9 100 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 MRPL37Q9BZE1 423 aaKnown RBP11.88□□□□□ -0.51
LIMS2-206ENST00000409754 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 UFSP2Q9NUQ7 469 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 RASL12Q9NYN1 266 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 TAAR3PQ9P1P4 343 aa11.88□□□□□ -0.51
LIMS2-206ENST00000409754 NKX2-6A6NCS4 301 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 DPRXA6NFQ7 191 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 KNG1P01042 644 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 SCTP09683 121 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 CFHR2P36980 270 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 GMFBP60983 142 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 SMIM21Q3B7S5 101 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 IGSF11Q5DX21 431 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
LIMS2-206ENST00000409754 ASCC1Q8N9N2 400 aaKnown RBP11.87□□□□□ -0.51
LIMS2-206ENST00000409754 COQ8AQ8NI60 647 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 GRPEL2Q8TAA5 225 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 PIK3IP1Q96FE7 263 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 PSMG3-AS1Q96PY0 264 aa11.87□□□□□ -0.51
LIMS2-206ENST00000409754 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
LIMS2-206ENST00000409754 hCG_1807616A0A1W2PRN6 198 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 ABCD4O14678 606 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 WNT9BO14905 357 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 PPYP01298 95 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 CD8AP01732 235 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 TK1P04183 234 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 AADACP22760 399 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 HERV-K104P61576 105 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 HLA-DRB3P79483 266 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 SLC9A3R2Q15599 337 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 KCTD9Q7L273 389 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 OR4A4PQ8NGN8 299 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 LRRC29Q8WV35 223 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 TOMM40LQ969M1 308 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 FLNBO75369 2602 aaKnown RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 ANKHD1Q8IWZ3 2542 aaKnown RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 CADP27708 2225 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 UNC79Q9P2D8 2635 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 A1L4Q6 167 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 CRYM-AS1A6NIL9 109 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 IFNL4K9M1U5 179 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 ZNF205O95201 554 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 DIRAS3O95661 229 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 AGAP20933 346 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 NFYAP23511 347 aaPredicted RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 CHRNB4P30926 498 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 GATA4P43694 442 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 FXYD4P59646 89 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 SNRPD2P62316 118 aaKnown RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 BSPH1Q075Z2 132 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 HERPUD1Q15011 391 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 LGALSLQ3ZCW2 172 aaPredicted RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 FAM90A1Q86YD7 464 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 SGPP2Q8IWX5 399 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 LILRB4Q8NHJ6 448 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 SEBOXQ9HB31 216 aaPredicted RBP11.86□□□□□ -0.51
LIMS2-206ENST00000409754 RAB18Q9NP72 206 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 OR14J1Q9UGF5 321 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 PCDHB10Q9UN67 800 aa11.86□□□□□ -0.51
LIMS2-206ENST00000409754 TACC2O95359 2948 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 IGKV1-6A0A0C4DH72 117 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 HMSDA8MTL9 139 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 SRRM5B3KS81 715 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 SPRY3O43610 288 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 TUSC2O75896 110 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 IFNA2P01563 188 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 KCNJ3P48549 501 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 ZNF81P51508 661 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms