RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SPICQ8N5J4 248 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 SMRP1Q8NCR6 262 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 LILRB4Q8NHJ6 448 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 TSPAN32Q96QS1 320 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 METTL1Q9UBP6 276 aaKnown RBP7.4□□□□□ -1.22
SCN9A-203ENST00000409672 RPLP1P05386 114 aaKnown RBP7.4□□□□□ -1.22
SCN9A-203ENST00000409672 COL8A1P27658 744 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 KIR3DL2P43630 455 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 RANP62826 216 aaKnown RBP7.4□□□□□ -1.22
SCN9A-203ENST00000409672 DCAF12L2Q5VW00 463 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 PELI3Q8N2H9 469 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 RBPMSQ93062 196 aaKnown RBP7.4□□□□□ -1.22
SCN9A-203ENST00000409672 GPR137Q96N19 417 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 C19orf43Q9BQ61 176 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 TCEAL7Q9BRU2 100 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 MMP24Q9Y5R2 645 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 FAM106CPP0CH98 169 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 DOLPP1Q86YN1 238 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF416Q9BWM5 594 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 GPR27Q9NS67 375 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 ST3GAL2Q16842 350 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 MOB1BQ7L9L4 216 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 MUC20Q8N307 709 aaPredicted RBP7.4□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF426Q9BUY5 554 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 IL21Q9HBE4 155 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 SH2D2AQ9NP31 389 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 NIT2Q9NQR4 276 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 M0R2Z0 102 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 FCN1O00602 326 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 MRPS14O60783 128 aaKnown RBP7.4□□□□□ -1.23
SCN9A-203ENST00000409672 SP9P0CG40 484 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 PRB4P10163 310 aaPredicted RBP7.4□□□□□ -1.23
SCN9A-203ENST00000409672 OR2Y1Q8NGV0 311 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 OR10J6PQ8NGY7 276 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 OTOSQ8NHW6 89 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 SLC25A19Q9HC21 320 aa7.4□□□□□ -1.23
SCN9A-203ENST00000409672 FBLL1A6NHQ2 334 aaKnown RBP7.39□□□□□ -1.23
SCN9A-203ENST00000409672 OR5B21A6NL26 309 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 MFNGO00587 321 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ZIC3O60481 467 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 PNPP00491 289 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 SSX1Q16384 188 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 NEU1Q99519 415 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 VAMP8Q9BV40 100 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ABCA3Q99758 1704 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 LYG2Q86SG7 212 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 SLC26A10Q8NG04 563 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ASB5Q8WWX0 329 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 LINC01387J3KSC0 135 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 DDOSTP39656 456 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 KIR2DS2P43631 304 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 UCNP55089 124 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 RPEL1Q2QD12 228 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 MYOZ3Q8TDC0 251 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ABHD14BQ96IU4 210 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF768Q9H5H4 540 aaKnown RBP7.39□□□□□ -1.23
SCN9A-203ENST00000409672 RNF24Q9Y225 148 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 UNQ5815/PRO19632Q6UWF5 114 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 UBE2DNLQ8IWF7 75 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 OR4S2Q8NH73 311 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 HGDQ93099 445 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 NPAS1Q99742 590 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 MPDU1O75352 247 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 B2MP61769 119 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
SCN9A-203ENST00000409672 NUFIP2Q7Z417 695 aaKnown RBP7.39□□□□□ -1.23
SCN9A-203ENST00000409672 TBX15Q96SF7 602 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 CST4P01036 141 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 PPOXP50336 477 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF154Q13106 437 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 CDK5R1Q15078 307 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 LYRM7Q5U5X0 104 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF561Q8N587 486 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 LFNGQ8NES3 379 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ANGPTL6Q8NI99 470 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-203ENST00000409672 FOCADQ5VW36 1801 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 CHST1O43916 411 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 PCMT1P22061 227 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 IZUMO4Q1ZYL8 232 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF429Q86V71 674 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 OR10G4Q8NGN3 311 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 OR10G9Q8NGN4 311 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 OR10G7Q8NGN6 311 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 PTP4A1Q93096 173 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 SGK494Q96LW2 274 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 CADP27708 2225 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 TFAP2AP05549 437 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 DRD3P35462 400 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 NHLRC1Q6VVB1 395 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 LRRC75AQ8NAA5 344 aa7.39□□□□□ -1.23
SCN9A-203ENST00000409672 C21orf140B9A014 251 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 CLDN20P56880 219 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 POLR2GP62487 172 aaKnown RBP eCLIP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 FAM53AQ6NSI3 398 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 IL11P20809 199 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms