RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PRDX4Q13162 271 aa11.56□□□□□ -0.56
COL6A2-204ENST00000409416 DEFB109BQ30KR1 87 aa11.56□□□□□ -0.56
COL6A2-204ENST00000409416 SMCO4Q9NRQ5 59 aa11.56□□□□□ -0.56
COL6A2-204ENST00000409416 TRAPPC2LQ9UL33 140 aa11.56□□□□□ -0.56
COL6A2-204ENST00000409416 ZZEF1O43149 2961 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 IGKV1-27A0A075B6S5 117 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 A0A1W2PPH5 198 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 DEDDO75618 318 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 CELA3BP08861 270 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 NQO2P16083 231 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 AADACP22760 399 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 PLA2G5P39877 138 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 ZNF133P52736 654 aaPredicted RBP11.55□□□□□ -0.56
COL6A2-204ENST00000409416 LSM6P62312 80 aaKnown RBP11.55□□□□□ -0.56
COL6A2-204ENST00000409416 GNMTQ14749 295 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 AWAT1Q58HT5 328 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 ZIC4Q8N9L1 334 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 ADPRHL1Q8NDY3 354 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 IMMP1LQ96LU5 166 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 GPR35Q9HC97 309 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 SLC2A9Q9NRM0 540 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 C10orf142B7Z368 130 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 TAAR5O14804 337 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 RAB2AP61019 212 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 CLN3Q13286 438 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 GUK1Q16774 197 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 DHRS7BQ6IAN0 325 aaPredicted RBP11.55□□□□□ -0.56
COL6A2-204ENST00000409416 CARFQ8N187 725 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 ZNF552Q9H707 407 aaPredicted RBP11.55□□□□□ -0.56
COL6A2-204ENST00000409416 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 TMEM38BQ9NVV0 291 aa11.55□□□□□ -0.56
COL6A2-204ENST00000409416 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
COL6A2-204ENST00000409416 GATCO43716 136 aaKnown RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 FCGR3AP08637 254 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 GABRA2P47869 451 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 SULT1A2P50226 295 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 RUNX1Q01196 453 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 RSPO1Q2MKA7 263 aaPredicted RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 FAM24BQ8N5W8 94 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 OR10V1Q8NGI7 309 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 SAT2Q96F10 170 aaPredicted RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 OR2H1Q9GZK4 316 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 KCNJ16Q9NPI9 418 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 IGLV3-12A0A075B6K2 115 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 UMAD1C9J7I0 102 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 CDIPTO14735 213 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 MT-CO3P00414 261 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 ARL6IP1Q15041 203 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 FAM89BQ8N5H3 189 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 TMEM251Q8N6I4 163 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 Q96M66 194 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 NAA60Q9H7X0 242 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 IGKV1-12A0A0C4DH73 117 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 CRYM-AS1A6NIL9 109 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 ANKRD30BLA7E2S9 258 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 TERTO14746 1132 aaKnown RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 RHBDL1O75783 438 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 NXPH2O95156 264 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 IGKV1D-12P01611 117 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 DVL1P1P54792 670 aaPredicted RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 ELLP55199 621 aaPredicted RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 SOX8P57073 446 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 DCAF10Q5QP82 559 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 TMEM123Q8N131 208 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 SYT3Q9BQG1 590 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 NUDT16L1Q9BRJ7 211 aaKnown RBP11.54□□□□□ -0.56
COL6A2-204ENST00000409416 CCL28Q9NRJ3 127 aa11.54□□□□□ -0.56
COL6A2-204ENST00000409416 CEP192Q8TEP8 1941 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 E5RGE8 158 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 VAMP5O95183 116 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 SERPINE2P07093 398 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 TUBG1P23258 451 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 SMIM8Q96KF7 97 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 PRO1933Q9H354 126 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 ERRFI1Q9UJM3 462 aaPredicted RBP11.53□□□□□ -0.56
COL6A2-204ENST00000409416 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 C9orf172C9J069 976 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 TK1P04183 234 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 CCL1P22362 96 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 TMEM267Q0VDI3 215 aaPredicted RBP11.53□□□□□ -0.56
COL6A2-204ENST00000409416 SLC10A1Q14973 349 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 PDZD11Q5EBL8 140 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 UBALD2Q8IYN6 164 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 WNT5BQ9H1J7 359 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 A0A0U1RQV5 110 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 A0A1W2PPE2 198 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 SMCO3A2RU48 225 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 C7orf77A4D0Y5 90 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 FGF5P12034 268 aa11.53□□□□□ -0.56
COL6A2-204ENST00000409416 BTNL3Q6UXE8 466 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms