RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 DACT3Q96B18 629 aaPredicted RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 ABHD1Q96SE0 405 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 CMSS1Q9BQ75 279 aaKnown RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 SCPEP1Q9HB40 452 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 MBNL3Q9NUK0 354 aaKnown RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 RPUSD1Q9UJJ7 312 aaKnown RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 PPIAL4CA0A0B4J2A2 164 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 A0A0G2JMP0 313 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 A0A0X1KG70 313 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 CTDSPLO15194 276 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 PHF1O43189 567 aaPredicted RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 MT-ND4P03905 459 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 DTYMKP23919 212 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 GLIPR1P48060 266 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 EDDM3BP56851 147 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 RPL31P62899 125 aaKnown RBP16.93■□□□□ 0.3
VSX1-203ENST00000409285 ARFRP1Q13795 201 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 IL18Q14116 193 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 ZNF880Q6PDB4 577 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 BTN2A1Q7KYR7 527 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 MOB1BQ7L9L4 216 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 ZNF554Q86TJ5 538 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 DTX3Q8N9I9 347 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 LY6G5BQ8NDX9 201 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 OR4M2Q8NGB6 313 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 CORO2AQ92828 525 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 AKIP1Q9NQ31 210 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 OR6C3Q9NZP0 311 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 KIF25Q9UIL4 384 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 LINC00312Q9Y6C7 94 aa16.93■□□□□ 0.3
VSX1-203ENST00000409285 FAM157AC9JC47 383 aa16.92■□□□□ 0.3
VSX1-203ENST00000409285 SULT1C2O00338 296 aa16.92■□□□□ 0.3
VSX1-203ENST00000409285 GNG2P59768 71 aa16.92■□□□□ 0.3
VSX1-203ENST00000409285 MRPS15P82914 257 aaKnown RBP16.92■□□□□ 0.3
VSX1-203ENST00000409285 ZNF45Q02386 682 aa16.92■□□□□ 0.3
VSX1-203ENST00000409285 PAX2Q02962 417 aa16.92■□□□□ 0.3
VSX1-203ENST00000409285 SRSF7Q16629 238 aaKnown RBP eCLIP16.92■□□□□ 0.3
VSX1-203ENST00000409285 FAM131AQ6UXB0 335 aa16.92■□□□□ 0.3
VSX1-203ENST00000409285 ELF5Q9UKW6 265 aaPredicted RBP16.92■□□□□ 0.3
VSX1-203ENST00000409285 MRPS7Q9Y2R9 242 aaKnown RBP16.92■□□□□ 0.3
VSX1-203ENST00000409285 ABCA1O95477 2261 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 MEIKINA0A087WXM9 373 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 hADV38S2A0JD32 116 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 C22orf46C9J442 243 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 SSX5O60225 188 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 ZFP36P26651 326 aaKnown RBP16.91■□□□□ 0.3
VSX1-203ENST00000409285 PRSS3P35030 304 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 ZNF79Q15937 498 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 Q6ZPA2 131 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 Q6ZS49 121 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 TCF23Q7RTU1 214 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 SNX29P2Q8IUI4 249 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 MFSD4AQ8N468 514 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 TPRX1Q8N7U7 411 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 NUDCD2Q8WVJ2 157 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 S100ZQ8WXG8 99 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 H1FXQ92522 213 aaKnown RBP16.91■□□□□ 0.3
VSX1-203ENST00000409285 C19orf12Q9NSK7 152 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 MGAT4AQ9UM21 535 aa16.91■□□□□ 0.3
VSX1-203ENST00000409285 UBE2J1Q9Y385 318 aaPredicted RBP16.91■□□□□ 0.3
VSX1-203ENST00000409285 F8P00451 2351 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 LOC105371242A0A075B767 164 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 B4DSR2 109 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 LPLP06858 475 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 FCGR3AP08637 254 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 CBX5P45973 191 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 TMEM249Q2WGJ8 235 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 TRAT1Q6PIZ9 186 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 GPX8Q8TED1 209 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 SMIM4Q8WVI0 70 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 OCSTAMPQ9BR26 566 aa16.9■□□□□ 0.3
VSX1-203ENST00000409285 HDHD3Q9BSH5 251 aaPredicted RBP16.9■□□□□ 0.3
VSX1-203ENST00000409285 TRGV10A0A0A0MS01 117 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 GABARAPH6UMI1 98 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 ENSAO43768 121 aaKnown RBP16.89■□□□□ 0.29
VSX1-203ENST00000409285 LIPFP07098 398 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 PTHLHP12272 177 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 C6orf183Q5T699 404 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 ZNF565Q8N9K5 539 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 LINC00574Q9H8X3 128 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 TAS2R3Q9NYW6 316 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 OPN4Q9UHM6 478 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 ANAPC10Q9UM13 185 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 HIVEP1P15822 2718 aa16.89■□□□□ 0.29
VSX1-203ENST00000409285 IGHV2-70DA0A0C4DH43 119 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 A0A1W2PPH5 198 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 MEIOCA2RUB1 952 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 GSTZ1O43708 216 aaPredicted RBP16.88■□□□□ 0.29
VSX1-203ENST00000409285 MSMBP08118 114 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 INHBBP09529 407 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 CGB3P0DN86 165 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 CGB7P0DN87 165 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 LCN2P80188 198 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 TMEM200BQ69YZ2 307 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 OR13A1Q8NGR1 328 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 OR4K15Q8NH41 348 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 GCDHQ92947 438 aaPredicted RBP16.88■□□□□ 0.29
VSX1-203ENST00000409285 COX4I2Q96KJ9 171 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 SRRQ9GZT4 340 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 CHMP1AQ9HD42 196 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms