RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SLC52A3Q9NQ40 469 aa10.78□□□□□ -0.68
SHANK2-203ENST00000409161 COL19A1Q14993 1142 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 SLC25A30Q5SVS4 291 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 NCMAPQ5T1S8 102 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 ABHD14BQ96IU4 210 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 SPATA45Q537H7 98 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 LEMD1Q68G75 181 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 PWWP2BQ6NUJ5 590 aa10.77□□□□□ -0.68
SHANK2-203ENST00000409161 ATRXP46100 2492 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.77□□□□□ -0.69
SHANK2-203ENST00000409161 ARG1P05089 322 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 PXNP49023 591 aaPredicted RBP10.77□□□□□ -0.69
SHANK2-203ENST00000409161 PCBP3P57721 371 aaKnown RBP10.77□□□□□ -0.69
SHANK2-203ENST00000409161 PSG5Q15238 335 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.69
SHANK2-203ENST00000409161 FXYD1O00168 92 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 GNG7O60262 68 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 ST6GAL2Q96JF0 529 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 FCMRO60667 390 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 TMEM108Q6UXF1 575 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 SYT8Q8NBV8 401 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 R3HDM4Q96D70 268 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 TRAV38-1A0A0B4J264 116 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 GAPDHP04406 335 aaKnown RBP10.77□□□□□ -0.69
SHANK2-203ENST00000409161 CSN3P07498 182 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 IER3P46695 156 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 AGERQ15109 404 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 TMEM136Q6ZRR5 245 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 NMUP48645 174 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 TAS2R60P59551 318 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 CNTD2Q9H8S5 307 aa10.77□□□□□ -0.69
SHANK2-203ENST00000409161 LINC01553A4QN01 128 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 CYB5R3P00387 301 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-203ENST00000409161 BCL2P10415 239 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PTX4Q96A99 478 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 WDR34Q96EX3 536 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 MSL2Q9HCI7 577 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 DNAL4O96015 105 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PCMT1P22061 227 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PPP1CCP36873 323 aaKnown RBP10.76□□□□□ -0.69
SHANK2-203ENST00000409161 OR3A4PP47883 348 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 ERVFRD-1P60508 538 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 DEFB103AP81534 67 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 HYAL1Q12794 435 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 RFLNAQ6ZTI6 216 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PARD6GQ9BYG4 376 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-203ENST00000409161 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 DEFB127Q9H1M4 99 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 GAMTQ14353 236 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PRSS36Q5K4E3 855 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 TMEM183AQ8IXX5 376 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 TRPM3Q9HCF6 1732 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-203ENST00000409161 NCKAP5O14513 1909 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 OLIG3Q7RTU3 272 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 Q8WTZ3 238 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 MRGPRX1Q96LB2 322 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 FOXF1Q12946 379 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 TWIST1Q15672 202 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PSMG4Q5JS54 123 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 ZG16BQ96DA0 208 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 FGF22Q9HCT0 170 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
SHANK2-203ENST00000409161 CXCL13O43927 109 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 HMGA2P52926 109 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 TMEM255AQ5JRV8 349 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-203ENST00000409161 OR6X1Q8NH79 312 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PTPRDP23468 1912 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
SHANK2-203ENST00000409161 IGHV3-20A0A0C4DH32 117 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 LMO7DNF2Z398 122 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 STRCP1A6NGW2 1772 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 FAM157CP0CG43 387 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 RAC3P60763 192 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 CDK2AP1O14519 115 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 LYZL6O75951 148 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 PRR35P0CG20 571 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 AESQ08117 197 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 CBLN2Q8IUK8 224 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 ZNF764Q96H86 408 aaPredicted RBP10.75□□□□□ -0.69
SHANK2-203ENST00000409161 OR51M1Q9H341 326 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 IGHV3-15A0A0B4J1V0 119 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 FBXL6Q8N531 539 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 WDR13Q9H1Z4 485 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 GPR27Q9NS67 375 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 CDAP32320 146 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 DNLZQ5SXM8 178 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 SPATA46Q5T0L3 261 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 TSPAN32Q96QS1 320 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 TRA2AQ13595 282 aaKnown RBP eCLIP10.75□□□□□ -0.69
SHANK2-203ENST00000409161 ADAMTS17Q8TE56 1095 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 ZMIZ1Q9ULJ6 1067 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 MMP17Q9ULZ9 603 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 OR8I2Q8N0Y5 310 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
SHANK2-203ENST00000409161 KCNE1BA0A087WTH5 132 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms