RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PAX6P26367 422 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 IL3RAP26951 378 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 RANBP1P43487 201 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OR3A4PP47883 348 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 RAB13P51153 203 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 WNT4P56705 351 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 ADARB1P78563 741 aaKnown RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 PIGYQ3MUY2 71 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 PDLIM3Q53GG5 364 aaPredicted RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OGFRL1Q5TC84 451 aaPredicted RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 RSBN1Q5VWQ0 802 aaPredicted RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 XAF1Q6GPH4 301 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 TRAT1Q6PIZ9 186 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OR8H3Q8N146 312 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 MS4A15Q8N5U1 240 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 OR4X2Q8NGF9 303 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM110DQ8TAY7 271 aaPredicted RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 NEK7Q8TDX7 302 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 SLC25A33Q9BSK2 321 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 MND1Q9BWT6 205 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 PPIL3Q9H2H8 161 aaKnown RBP7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 DCLRE1BQ9H816 532 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 SERTAD4Q9NUC0 356 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 PLCXD1Q9NUJ7 323 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 GHRLQ9UBU3 117 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 FOXJ3Q9UPW0 622 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 SIGLEC9Q9Y336 463 aa7.3□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A10PA6NDY2 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A18PA6NE21 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A16PA6NEW6 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A20PA6NIJ5 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A7PA6NKC0 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A12PA8MX19 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A5PA8MXJ8 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A23PA8MXZ1 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 MCRIP1C9JLW8 97 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 NPIPB11E5RHQ5 1161 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 J3QR06 171 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 TXNL1O43396 289 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 ORC5O43913 435 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 MMP23AO75900 390 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 CDRT1O95170 752 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A15PP0C7V4 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A13PP0C7W8 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A14PP0C7W9 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM90A24PP0C7X0 464 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 IGFBP3P17936 291 aaPredicted RBP7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 DOC2BQ14184 412 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 C17orf58Q2M2W7 97 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 Q3ZCU0 254 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 SLC22A6Q4U2R8 563 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 LDLRAD2Q5SZI1 272 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 ATAD3CQ5T2N8 411 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 C6orf183Q5T699 404 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 AWAT2Q6E213 333 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 CCBE1Q6UXH8 406 aaPredicted RBP7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 AHSA2Q719I0 299 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 THNSL2Q86YJ6 484 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 JAGN1Q8N5M9 183 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 SUMF2Q8NBJ7 301 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 OR52M1Q8NGK5 317 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 OR13A1Q8NGR1 328 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 OR10K1Q8NGX5 313 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 OR10X1Q8NGY0 326 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 GGHQ92820 318 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 MYDGFQ969H8 173 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 RBM14Q96PK6 669 aaKnown RBP7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 OR14A2Q96R54 314 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 UQCC2Q9BRT2 126 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 WNT10AQ9GZT5 417 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 CST11Q9H112 138 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 VCX3BQ9H321 246 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 SCN3BQ9NY72 215 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 PSORS1C1Q9UIG5 152 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 MRPS28Q9Y2Q9 187 aaKnown RBP7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 MOB4Q9Y3A3 225 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 NOTCH1P46531 2555 aa7.29□□□□□ -1.24
SNORD88A-201ENST00000408314 KIAA2026Q5HYC2 2103 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 TRBV5-7A0A0A0MS05 114 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 FAM172BPA6NC97 362 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 ERICH4A6NGS2 130 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 AIPO00170 330 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 GEMIN2O14893 280 aaKnown RBP7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 SPINT2O43291 252 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 GLAP06280 429 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 UBBP0CG47 229 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 CGB3P0DN86 165 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 CGB7P0DN87 165 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 CELP19835 753 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 HES1Q14469 280 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 RNLSQ5VYX0 342 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 RNF144BQ7Z419 303 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 REC114Q7Z4M0 266 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 CENPVQ7Z7K6 275 aaPredicted RBP7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 ZNF554Q86TJ5 538 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 C11orf44Q8N8P7 122 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 C8orf31Q8N9H6 132 aa7.28□□□□□ -1.24
SNORD88A-201ENST00000408314 ZNF485Q8NCK3 441 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms