RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 IGHG2P01859 326 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 SNRNP70P08621 437 aaKnown RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 GNAO1P09471 354 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 ATF1P18846 271 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 PRKACBP22694 351 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 ETV1P50549 477 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 LUMP51884 338 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 GTF2A1P52655 376 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 PNLIPRP3Q17RR3 467 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 CXorf66Q5JRM2 361 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 BAIAP2L2Q6UXY1 529 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 STPG2Q8N412 459 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF555Q8NEP9 628 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 CYGBQ8WWM9 190 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 FGGYQ96C11 551 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 PDCD1LG2Q9BQ51 273 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 DCLRE1BQ9H816 532 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 RHOFQ9HBH0 211 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 RBFOX1Q9NWB1 397 aaKnown RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR6C3Q9NZP0 311 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
APOBEC3B-204ENST00000407298 IGKV1-12A0A0C4DH73 117 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 ODAMA1E959 279 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 SEC14L6B5MCN3 397 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 AP4M1O00189 453 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 SIRPB1O00241 398 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR2H2O95918 312 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 LALBAP00709 142 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 IGKV1D-12P01611 117 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 CSN2P05814 226 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 BCL3P20749 454 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 CDX1P47902 265 aaPredicted RBP9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 GLIPR1P48060 266 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 NPBWR2P48146 333 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 RAB7AP51149 207 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 INSL3P51460 131 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 MTCP1P56278 107 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 AESQ08117 197 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 MADCAM1Q13477 382 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 KRBOX4Q5JUW0 171 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR2G6Q5TZ20 316 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR8H3Q8N146 312 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 DRAM1Q8N682 238 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF565Q8N9K5 539 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 CHST4Q8NCG5 386 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR13C3Q8NGS6 347 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR13C9Q8NGT0 318 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR56B4Q8NH76 319 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 HAVCR2Q8TDQ0 301 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 FBLIM1Q8WUP2 373 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 SPSB1Q96BD6 273 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 OPALINQ96PE5 141 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 HMG20AQ9NP66 347 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 C8orf4Q9NR00 106 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 NKX1-2Q9UD57 310 aaPredicted RBP9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 GSTK1Q9Y2Q3 226 aa9.67□□□□□ -0.86
APOBEC3B-204ENST00000407298 KBTBD11-OT1A0A1B0GTJ5 212 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 MT-ND2P03891 347 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF20P17024 532 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 NFYBP25208 207 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 POU3F4P49335 361 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 SNU13P55769 128 aaKnown RBP9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 PDZK1IP1Q13113 114 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 FOXE3Q13461 319 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 CDK5R1Q15078 307 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 LHFPL2Q6ZUX7 228 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF485Q8NCK3 441 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 RFT1Q96AA3 541 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 MRPL48Q96GC5 212 aaKnown RBP9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 RCHY1Q96PM5 261 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 SPACA5Q96QH8 159 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 NEK6Q9HC98 313 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 CHCHD3Q9NX63 227 aaKnown RBP9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 CLEC2DQ9UHP7 191 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 LINC00527Q9UJ94 153 aa9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 DIMT1Q9UNQ2 313 aaKnown RBP9.66□□□□□ -0.86
APOBEC3B-204ENST00000407298 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 LCE6AA0A183 80 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 J3QR06 171 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 RRP9O43818 475 aaKnown RBP9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 LY86O95711 162 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 ELANEP08246 267 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 OCM2P0CE71 109 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 OCMP0CE72 109 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF44P15621 663 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 DCKP27707 260 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 C21orf33P30042 268 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 GDNFP39905 211 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 CAPGP40121 348 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZP1P60852 638 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 SCN1BQ07699 218 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 MRPL28Q13084 256 aaKnown RBP9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 GPR50Q13585 617 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms