RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 UBE2J1Q9Y385 318 aaPredicted RBP24.13■■□□□ 1.45
USP42-202ENST00000404008 MEIKINA0A087WXM9 373 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 DPPA5A6NC42 116 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 M0R1W7 72 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 CCL3L1P16619 93 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 Q6ZTK2 550 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 Q8N7P7 452 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 AP3S1Q92572 193 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 CORO2AQ92828 525 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 PECRQ9BY49 303 aa24.12■■□□□ 1.45
USP42-202ENST00000404008 MXRA5Q9NR99 2828 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 TRGV10A0A0A0MS01 117 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 CA11O75493 328 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 TOX4O94842 621 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 SOX6P35712 828 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 DLX6P56179 175 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 UBE2NLQ5JXB2 153 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 C1orf122Q6ZSJ8 110 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 TRAPPC6BQ86SZ2 158 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 RAB3CQ96E17 227 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 ZNF714Q96N38 554 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 OR6C3Q9NZP0 311 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 CCDC59Q9P031 241 aaKnown RBP24.11■■□□□ 1.45
USP42-202ENST00000404008 NDUFA13Q9P0J0 144 aa24.11■■□□□ 1.45
USP42-202ENST00000404008 SONP18583 2426 aaKnown RBP24.11■■□□□ 1.45
USP42-202ENST00000404008 KIAA2026Q5HYC2 2103 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 SCGNO76038 276 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 MT-ND4P03905 459 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 ZNF728P0DKX0 622 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 SAMD12Q8N8I0 201 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 PCGF1Q9BSM1 259 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 COMMD3Q9UBI1 195 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 MTORP42345 2549 aa24.1■■□□□ 1.45
USP42-202ENST00000404008 C11orf42Q8N5U0 333 aa24.09■■□□□ 1.45
USP42-202ENST00000404008 OR13A1Q8NGR1 328 aa24.09■■□□□ 1.45
USP42-202ENST00000404008 UPRTQ96BW1 309 aa24.09■■□□□ 1.45
USP42-202ENST00000404008 TBX15Q96SF7 602 aa24.09■■□□□ 1.45
USP42-202ENST00000404008 ABCG5Q9H222 651 aa24.09■■□□□ 1.45
USP42-202ENST00000404008 C17orf98A8MV24 154 aa24.08■■□□□ 1.45
USP42-202ENST00000404008 INAFM1C9JVW0 142 aa24.08■■□□□ 1.45
USP42-202ENST00000404008 HIST1H1DP16402 221 aaKnown RBP24.08■■□□□ 1.45
USP42-202ENST00000404008 VMO1Q7Z5L0 202 aa24.08■■□□□ 1.45
USP42-202ENST00000404008 TAS2R3Q9NYW6 316 aa24.08■■□□□ 1.45
USP42-202ENST00000404008 AK3Q9UIJ7 227 aa24.08■■□□□ 1.45
USP42-202ENST00000404008 KCNK7Q9Y2U2 307 aa24.08■■□□□ 1.45
USP42-202ENST00000404008 MFNGO00587 321 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 RBP4P02753 201 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 GLP1RP43220 463 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 OLFML2AQ68BL7 652 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 IL17RELQ6ZVW7 336 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 ZNF565Q8N9K5 539 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 MRPL30Q8TCC3 161 aaKnown RBP24.07■■□□□ 1.44
USP42-202ENST00000404008 GAL3ST2Q9H3Q3 398 aa24.07■■□□□ 1.44
USP42-202ENST00000404008 METTL8Q9H825 291 aaKnown RBP24.07■■□□□ 1.44
USP42-202ENST00000404008 A0A0A6YYH2 397 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 TRAV39A0A0B4J263 110 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 A6NJ64 397 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 GNB3P16520 340 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 HNF1AP20823 631 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 MZT2AQ6P582 158 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 OR4K15Q8NH41 348 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 MRGPRDQ8TDS7 321 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 CCDC107Q8WV48 283 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 CMTM3Q96MX0 182 aa24.06■■□□□ 1.44
USP42-202ENST00000404008 UNKLQ9H9P5 680 aaKnown RBP24.06■■□□□ 1.44
USP42-202ENST00000404008 hCG_1809904A0A1W2PP81 198 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 A0A1W2PPE2 198 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 A0A1W2PR64 198 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 A0A1W2PRV1 198 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 NAPSAO96009 420 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 CGB3P0DN86 165 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 CGB7P0DN87 165 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 ERVFRD-1P60508 538 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 FOXB2Q5VYV0 432 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 TEX29Q8N6K0 151 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 PHF21AQ96BD5 680 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 DGCR14Q96DF8 476 aaKnown RBP24.05■■□□□ 1.44
USP42-202ENST00000404008 ZMAT3Q9HA38 289 aaKnown RBP24.05■■□□□ 1.44
USP42-202ENST00000404008 SIRT7Q9NRC8 400 aa24.05■■□□□ 1.44
USP42-202ENST00000404008 A0A075B6Q4 140 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 ZNF729A6NN14 1252 aaPredicted RBP24.04■■□□□ 1.44
USP42-202ENST00000404008 FSHBP01225 129 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 PRTN3P24158 256 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 DLX1P56177 255 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 C17orf58Q2M2W7 97 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 S100A16Q96FQ6 103 aaKnown RBP24.04■■□□□ 1.44
USP42-202ENST00000404008 SLIRPQ9GZT3 109 aaKnown RBP24.04■■□□□ 1.44
USP42-202ENST00000404008 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.04■■□□□ 1.446e-7■■■□□ 14.8
USP42-202ENST00000404008 CDC42EP3Q9UKI2 254 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 TRAPPC2LQ9UL33 140 aa24.04■■□□□ 1.44
USP42-202ENST00000404008 KBTBD11-OT1A0A1B0GTJ5 212 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 HPGDSO60760 199 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 CLPXO76031 633 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 APOA1P02647 267 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 EIF4EP06730 217 aaKnown RBP24.03■■□□□ 1.44
USP42-202ENST00000404008 CDK2P24941 298 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 ARL6IP1Q15041 203 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 CDNFQ49AH0 187 aa24.03■■□□□ 1.44
USP42-202ENST00000404008 KLF17Q5JT82 389 aaPredicted RBP24.03■■□□□ 1.44
USP42-202ENST00000404008 NANPQ8TBE9 248 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms