RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 OR11L1Q8NGX0 322 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 LILRB1Q8NHL6 650 aaPredicted RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 ZFAND1Q8TCF1 268 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 TMEM230Q96A57 120 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 ZNF436Q9C0F3 470 aaPredicted RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 DNAJB11Q9UBS4 358 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 PPP1R3CQ9UQK1 317 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 HIVEP3Q5T1R4 2406 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 IGKV1D-17A0A075B6S4 117 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 DEFB108AA8MXU0 73 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 B9A039 149 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 TFF1P04155 84 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 TK1P04183 234 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 KCNJ3P48549 501 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 NKX2-5P52952 324 aaPredicted RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 FAM209AQ5JX71 171 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 SLC35E4Q6ICL7 350 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 MOB1BQ7L9L4 216 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 NOXA1Q86UR1 476 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 OR4A4PQ8NGN8 299 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 ITLN2Q8WWU7 325 aaPredicted RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 CNTNAP3Q9BZ76 1288 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 SHARPINQ9H0F6 387 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 MS4A5Q9H3V2 200 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 SLC23A1Q9UHI7 598 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 MGAT4AQ9UM21 535 aa11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 C14orf166Q9Y224 244 aaKnown RBP11.16□□□□□ -0.62
CEACAM1-206ENST00000403136 ANKHD1Q8IWZ3 2542 aaKnown RBP11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 CHD3Q12873 2000 aaKnown RBP11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 IGKV1-6A0A0C4DH72 117 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 BET1O15155 118 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 C1QBP02746 253 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 CTSDP07339 412 aaPredicted RBP11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 ZNF728P0DKX0 622 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 AADACP22760 399 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 VAMP1P23763 118 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 OR3A1P47881 315 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 UCP3P55916 312 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 HLA-DRB3P79483 266 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 AESQ08117 197 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 HERPUD1Q15011 391 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 TESK1Q15569 626 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 C2orf68Q2NKX9 166 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 NLRC3Q7RTR2 1065 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 FAM222BQ8WU58 562 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 MITD1Q8WV92 249 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 MOB3AQ96BX8 217 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 PIK3IP1Q96FE7 263 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 TMEM204Q9BSN7 226 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 EGLN1Q9GZT9 426 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 MBNL3Q9NUK0 354 aaKnown RBP11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
CEACAM1-206ENST00000403136 TRAV39A0A0B4J263 110 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 TMEM30CPA0ZSE6 113 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 SMLR1H3BR10 107 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 SLC22A5O76082 557 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 OR2A4O95047 310 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 DUS4LO95620 317 aaKnown RBP11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 IRF2P14316 349 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 CD34P28906 385 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 GABRA2P47869 451 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 GZMKP49863 264 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 FXYD4P59646 89 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 FAM201AQ5SY85 155 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 ASCC1Q8N9N2 400 aaKnown RBP11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 TOMM40LQ969M1 308 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 SNX22Q96L94 193 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 OR2A7Q96R45 310 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 DLL4Q9NR61 685 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
CEACAM1-206ENST00000403136 ZNF737O75373 536 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 SFT2D2O95562 160 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 DIRAS3O95661 229 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 PPYP01298 95 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 CD80P33681 288 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 HERV-K104P61576 105 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 ANGPTL6Q8NI99 470 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 CASTOR1Q8WTX7 329 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 COQ2Q96H96 371 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 PHB2Q99623 299 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 TRAF4Q9BUZ4 470 aaPredicted RBP11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 CHIAQ9BZP6 476 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 FXYD6Q9H0Q3 95 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 CLEC4MQ9H2X3 399 aaPredicted RBP11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 DYNLRB1Q9NP97 96 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 PIPOXQ9P0Z9 390 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 KIF25Q9UIL4 384 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 TRBV6-7A0A0A0MS04 114 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 LRRC30A6NM36 301 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms