RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 ST8SIA3O43173 380 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 CST4P01036 141 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 TK1P04183 234 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 ALDH3B1P43353 468 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 RUNX1Q01196 453 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 GNMTQ14749 295 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 C14orf79Q96F83 325 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 PLPPR2Q96GM1 343 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 OR14J1Q9UGF5 321 aa9.53□□□□□ -0.88
SCFD2-202ENST00000401642 DOCK11Q5JSL3 2073 aa9.52□□□□□ -0.88
SCFD2-202ENST00000401642 MED12LQ86YW9 2145 aa9.52□□□□□ -0.88
SCFD2-202ENST00000401642 C3orf85A0A1B0GTC6 90 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 HSPA12AO43301 675 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 TNFSF15O95150 251 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 CRYBA1P05813 215 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 MMP7P09237 267 aaPredicted RBP9.52□□□□□ -0.89
SCFD2-202ENST00000401642 GFRA1P56159 465 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 ERVS71-1P61550 626 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 PLP2Q04941 152 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 SLC25A24Q6NUK1 477 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 ZNF818PQ6ZRF7 136 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 FOXL2NBQ6ZUU3 175 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 LGI3Q8N145 548 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 HPSE2Q8WWQ2 592 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 KIRREL1Q96J84 757 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 SPACA1Q9HBV2 294 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 B4GALT7Q9UBV7 327 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 KCNS2Q9ULS6 477 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 PPP1R3CQ9UQK1 317 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 NBASA2RRP1 2371 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 CEACAM18A8MTB9 384 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 CYTIPO60759 359 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 WISP2O76076 250 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 IGHV2-70P01814 119 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 GRPP07492 148 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 PLA2G5P39877 138 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 TSPAN7P41732 249 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 CEBPDP49716 269 aaPredicted RBP9.52□□□□□ -0.89
SCFD2-202ENST00000401642 F2RL1P55085 397 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 SRSF6Q13247 344 aaKnown RBP9.52□□□□□ -0.89
SCFD2-202ENST00000401642 DCAF10Q5QP82 559 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 MKXQ8IYA7 352 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 GTF3AQ92664 365 aaKnown RBP9.52□□□□□ -0.89
SCFD2-202ENST00000401642 NTNG2Q96CW9 530 aa9.52□□□□□ -0.89
SCFD2-202ENST00000401642 TERTO14746 1132 aaKnown RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 MPPED1O15442 326 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 JTBO76095 146 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ARG1P05089 322 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 PPP1CCP36873 323 aaKnown RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 IDH3GP51553 393 aaPredicted RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 VAMP2P63027 116 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 PEA15Q15121 130 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ABLIM2Q6H8Q1 611 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 DPPA2Q7Z7J5 298 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ZDHHC23Q8IYP9 409 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 CLCC1Q96S66 551 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 FAM173AQ9BQD7 235 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ZNF703Q9H7S9 590 aaPredicted RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ZDHHC8Q9ULC8 765 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 PUS1Q9Y606 427 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 E5RGE8 158 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 CELA3BP08861 270 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 MEOX1P50221 254 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 LHX2P50458 406 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 EIF5AP63241 154 aaKnown RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 RPP30P78346 268 aaKnown RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 IL15RAQ13261 267 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 HAGHQ16775 308 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 FAM53AQ6NSI3 398 aaPredicted RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 IP6K3Q96PC2 410 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 TAAR9Q96RI9 348 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 DNAJB11Q9UBS4 358 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 RNF150Q9ULK6 438 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 NSG2Q9Y328 171 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 BORCS7-ASMTA0A0B4J1R7 106 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 CD300LBA8K4G0 201 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 LYZL6O75951 148 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 FBP1P09467 338 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 NAAAQ02083 359 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 SSX3Q99909 188 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 RARRES2Q99969 163 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 PRO3102Q9H379 93 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 RGCCQ9H4X1 137 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 TMEM100Q9NV29 134 aa9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ERRFI1Q9UJM3 462 aaPredicted RBP9.51□□□□□ -0.89
SCFD2-202ENST00000401642 ARHGAP21Q5T5U3 1957 aa9.5□□□□□ -0.89
SCFD2-202ENST00000401642 SMG1Q96Q15 3661 aaKnown RBP9.5□□□□□ -0.89
SCFD2-202ENST00000401642 IFNA4P05014 189 aa9.5□□□□□ -0.89
SCFD2-202ENST00000401642 IAPPP10997 89 aa9.5□□□□□ -0.89
SCFD2-202ENST00000401642 NKX2-1P43699 371 aaPredicted RBP9.5□□□□□ -0.89
SCFD2-202ENST00000401642 CLDN18P56856 261 aa9.5□□□□□ -0.89
SCFD2-202ENST00000401642 RTL6Q6ICC9 239 aa9.5□□□□□ -0.89
SCFD2-202ENST00000401642 UQCC3Q6UW78 93 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms